Results 41 - 60 of 158 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
6356 | 5' | -53.2 | NC_001847.1 | + | 8601 | 0.66 | 0.961222 |
Target: 5'- -cGCCAGggGcgGCGCUcg---GCCGg -3' miRNA: 3'- gaCGGUCuuUuaCGCGGacaugCGGC- -5' |
|||||||
6356 | 5' | -53.2 | NC_001847.1 | + | 115134 | 0.66 | 0.961222 |
Target: 5'- -cGCCcuauuGGAAGUGCGCugcuCUGgcgggGCGCCu -3' miRNA: 3'- gaCGGu----CUUUUACGCG----GACa----UGCGGc -5' |
|||||||
6356 | 5' | -53.2 | NC_001847.1 | + | 49583 | 0.66 | 0.961222 |
Target: 5'- -gGCCGacGGcgGCGCCUGgGCGCa- -3' miRNA: 3'- gaCGGUcuUUuaCGCGGACaUGCGgc -5' |
|||||||
6356 | 5' | -53.2 | NC_001847.1 | + | 49948 | 0.66 | 0.961222 |
Target: 5'- -cGCCGGGcugcccgGCGCCgaGUACGCg- -3' miRNA: 3'- gaCGGUCUuuua---CGCGGa-CAUGCGgc -5' |
|||||||
6356 | 5' | -53.2 | NC_001847.1 | + | 127025 | 0.66 | 0.961222 |
Target: 5'- -cGCCccuGggGccccGCGCCUGcgcugGCGCCGc -3' miRNA: 3'- gaCGGu--CuuUua--CGCGGACa----UGCGGC- -5' |
|||||||
6356 | 5' | -53.2 | NC_001847.1 | + | 124261 | 0.66 | 0.953498 |
Target: 5'- gCUGCCGcAGGcgGUcuGCCUGgGCGCCc -3' miRNA: 3'- -GACGGUcUUUuaCG--CGGACaUGCGGc -5' |
|||||||
6356 | 5' | -53.2 | NC_001847.1 | + | 74044 | 0.66 | 0.949273 |
Target: 5'- cCUGCUGuGGAAcgGCaaCgUGUACGCCGa -3' miRNA: 3'- -GACGGU-CUUUuaCGc-GgACAUGCGGC- -5' |
|||||||
6356 | 5' | -53.2 | NC_001847.1 | + | 56815 | 0.67 | 0.929866 |
Target: 5'- -gGCCGGc----GCGCCUGgggGCGCgGg -3' miRNA: 3'- gaCGGUCuuuuaCGCGGACa--UGCGgC- -5' |
|||||||
6356 | 5' | -53.2 | NC_001847.1 | + | 1359 | 0.67 | 0.935098 |
Target: 5'- -gGCCAuGuccuUGCGCCcGUcgaGCGCCGg -3' miRNA: 3'- gaCGGU-CuuuuACGCGGaCA---UGCGGC- -5' |
|||||||
6356 | 5' | -53.2 | NC_001847.1 | + | 129780 | 0.67 | 0.935098 |
Target: 5'- -cGCCGGAGccUGgGCCcGgccGCGCCGc -3' miRNA: 3'- gaCGGUCUUuuACgCGGaCa--UGCGGC- -5' |
|||||||
6356 | 5' | -53.2 | NC_001847.1 | + | 43542 | 0.67 | 0.935098 |
Target: 5'- -cGCgAGGAGAaGCGCCgccgcGaGCGCCGc -3' miRNA: 3'- gaCGgUCUUUUaCGCGGa----CaUGCGGC- -5' |
|||||||
6356 | 5' | -53.2 | NC_001847.1 | + | 3909 | 0.67 | 0.940075 |
Target: 5'- -aGCCAGcgcggGCGCCgGUugcGCGCCc -3' miRNA: 3'- gaCGGUCuuuuaCGCGGaCA---UGCGGc -5' |
|||||||
6356 | 5' | -53.2 | NC_001847.1 | + | 98871 | 0.67 | 0.940075 |
Target: 5'- --cCCGGAAGggcgcGUGCGCCUGggcgGCccagGCCGg -3' miRNA: 3'- gacGGUCUUU-----UACGCGGACa---UG----CGGC- -5' |
|||||||
6356 | 5' | -53.2 | NC_001847.1 | + | 131224 | 0.66 | 0.944799 |
Target: 5'- gCUGCCAGcgcuGUGCGUgcGUccGCGCCa -3' miRNA: 3'- -GACGGUCuuu-UACGCGgaCA--UGCGGc -5' |
|||||||
6356 | 5' | -53.2 | NC_001847.1 | + | 10542 | 0.66 | 0.944799 |
Target: 5'- -gGCCcGggGAcccGCGCCcGgccgGCGCCGg -3' miRNA: 3'- gaCGGuCuuUUa--CGCGGaCa---UGCGGC- -5' |
|||||||
6356 | 5' | -53.2 | NC_001847.1 | + | 70808 | 0.66 | 0.944799 |
Target: 5'- -gGCCGGGAGGggaucCGCCga-GCGCCGa -3' miRNA: 3'- gaCGGUCUUUUac---GCGGacaUGCGGC- -5' |
|||||||
6356 | 5' | -53.2 | NC_001847.1 | + | 127953 | 0.66 | 0.944799 |
Target: 5'- -cGCUcGAGGAcGCGCuccaaaucCUGUACGCCa -3' miRNA: 3'- gaCGGuCUUUUaCGCG--------GACAUGCGGc -5' |
|||||||
6356 | 5' | -53.2 | NC_001847.1 | + | 21756 | 0.66 | 0.944799 |
Target: 5'- -cGCgCGGggGGgccgccgGCGCCgGgcccgGCGCCGg -3' miRNA: 3'- gaCG-GUCuuUUa------CGCGGaCa----UGCGGC- -5' |
|||||||
6356 | 5' | -53.2 | NC_001847.1 | + | 67195 | 0.66 | 0.944799 |
Target: 5'- cCUGCCGcGGcuGUGUGCCgucGUgcugcgcggACGCCGu -3' miRNA: 3'- -GACGGU-CUuuUACGCGGa--CA---------UGCGGC- -5' |
|||||||
6356 | 5' | -53.2 | NC_001847.1 | + | 82732 | 0.66 | 0.944799 |
Target: 5'- -cGCgCGGGcccaGCGCCUGgagcacgGCGCCGu -3' miRNA: 3'- gaCG-GUCUuuuaCGCGGACa------UGCGGC- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home