Results 21 - 40 of 578 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
6745 | 5' | -57.7 | NC_001875.2 | + | 10461 | 0.66 | 0.83644 |
Target: 5'- nCGCGgcgGCGCGCuCAGUGA-AUGGCg -3' miRNA: 3'- cGCGCag-CGCGCGuGUCGUUgUGCCG- -5' |
|||||||
6745 | 5' | -57.7 | NC_001875.2 | + | 114200 | 0.66 | 0.819737 |
Target: 5'- cGCGCGaUUGCGCaaGUugGGCggUACGu- -3' miRNA: 3'- -CGCGC-AGCGCG--CGugUCGuuGUGCcg -5' |
|||||||
6745 | 5' | -57.7 | NC_001875.2 | + | 116873 | 0.66 | 0.811131 |
Target: 5'- gGCGUGUUGgGCgacgGCACAaacucuucgucuGCGcuagccgcGCGCGGCg -3' miRNA: 3'- -CGCGCAGCgCG----CGUGU------------CGU--------UGUGCCG- -5' |
|||||||
6745 | 5' | -57.7 | NC_001875.2 | + | 7392 | 0.66 | 0.819737 |
Target: 5'- cGCG-GUUGCGCGaCGCGGUcgcaaaacauAUugGGCc -3' miRNA: 3'- -CGCgCAGCGCGC-GUGUCGu---------UGugCCG- -5' |
|||||||
6745 | 5' | -57.7 | NC_001875.2 | + | 122470 | 0.66 | 0.811131 |
Target: 5'- gGCuGCG--GCGCGCGCAGCAccuuuGCGauGCc -3' miRNA: 3'- -CG-CGCagCGCGCGUGUCGU-----UGUgcCG- -5' |
|||||||
6745 | 5' | -57.7 | NC_001875.2 | + | 71107 | 0.66 | 0.83644 |
Target: 5'- aCuCGUCGUGCGUuugguguuGCuGUGGCugGGCg -3' miRNA: 3'- cGcGCAGCGCGCG--------UGuCGUUGugCCG- -5' |
|||||||
6745 | 5' | -57.7 | NC_001875.2 | + | 40785 | 0.66 | 0.839695 |
Target: 5'- gGCGUGcugCGCGUGCcCAGCAccaccACAuccacacagucguucCGGCc -3' miRNA: 3'- -CGCGCa--GCGCGCGuGUCGU-----UGU---------------GCCG- -5' |
|||||||
6745 | 5' | -57.7 | NC_001875.2 | + | 110585 | 0.66 | 0.844521 |
Target: 5'- cCGCGcCGCGCGCGCgccuggaccAGCuuCGCcaacuGGUg -3' miRNA: 3'- cGCGCaGCGCGCGUG---------UCGuuGUG-----CCG- -5' |
|||||||
6745 | 5' | -57.7 | NC_001875.2 | + | 96034 | 0.66 | 0.825663 |
Target: 5'- uGUGCGUgGCGCGCgaguuuaacuguuuGCGcGCcauCACGGg -3' miRNA: 3'- -CGCGCAgCGCGCG--------------UGU-CGuu-GUGCCg -5' |
|||||||
6745 | 5' | -57.7 | NC_001875.2 | + | 52649 | 0.66 | 0.819737 |
Target: 5'- uGUGCG--GCGCGgACAuuuaccaCAACACGGCc -3' miRNA: 3'- -CGCGCagCGCGCgUGUc------GUUGUGCCG- -5' |
|||||||
6745 | 5' | -57.7 | NC_001875.2 | + | 107835 | 0.66 | 0.811131 |
Target: 5'- cGCGCccgGUGCGCcuuGCGACGCGcGCg -3' miRNA: 3'- -CGCGcagCGCGCGuguCGUUGUGC-CG- -5' |
|||||||
6745 | 5' | -57.7 | NC_001875.2 | + | 118028 | 0.66 | 0.811131 |
Target: 5'- cCGCGaccaGUGCG-ACGGCAACGCcGCg -3' miRNA: 3'- cGCGCag--CGCGCgUGUCGUUGUGcCG- -5' |
|||||||
6745 | 5' | -57.7 | NC_001875.2 | + | 41120 | 0.66 | 0.83644 |
Target: 5'- -gGCGUCGUGUGC-CAGC---GCGuGCc -3' miRNA: 3'- cgCGCAGCGCGCGuGUCGuugUGC-CG- -5' |
|||||||
6745 | 5' | -57.7 | NC_001875.2 | + | 39168 | 0.66 | 0.811131 |
Target: 5'- cCGCGagGCGgGC-CGGCGguuGCGUGGCg -3' miRNA: 3'- cGCGCagCGCgCGuGUCGU---UGUGCCG- -5' |
|||||||
6745 | 5' | -57.7 | NC_001875.2 | + | 39023 | 0.66 | 0.828177 |
Target: 5'- -aGU-UUGCGCGCACcuCGGCAuCGGCg -3' miRNA: 3'- cgCGcAGCGCGCGUGucGUUGU-GCCG- -5' |
|||||||
6745 | 5' | -57.7 | NC_001875.2 | + | 77253 | 0.66 | 0.811131 |
Target: 5'- -aGCcUCGCGCaaaGCAGCGAUuCGGUg -3' miRNA: 3'- cgCGcAGCGCGcg-UGUCGUUGuGCCG- -5' |
|||||||
6745 | 5' | -57.7 | NC_001875.2 | + | 23815 | 0.66 | 0.802364 |
Target: 5'- cGCgGCGUCGgGCGCGCcGUGucucUGGCg -3' miRNA: 3'- -CG-CGCAGCgCGCGUGuCGUugu-GCCG- -5' |
|||||||
6745 | 5' | -57.7 | NC_001875.2 | + | 75618 | 0.66 | 0.83644 |
Target: 5'- -gGCGUCgGCGUugGCGuCGGCGuugGCGuCGGCg -3' miRNA: 3'- cgCGCAG-CGCG--CGU-GUCGU---UGU-GCCG- -5' |
|||||||
6745 | 5' | -57.7 | NC_001875.2 | + | 42306 | 0.66 | 0.828177 |
Target: 5'- gGCGCcaaGUacagaucgaGCGCGCcCAGCGGCcccaGGCg -3' miRNA: 3'- -CGCG---CAg--------CGCGCGuGUCGUUGug--CCG- -5' |
|||||||
6745 | 5' | -57.7 | NC_001875.2 | + | 74066 | 0.66 | 0.814593 |
Target: 5'- gGCGUGgaUUGUGCGCGCcccucgcaaaaccuGCAGUugGGCa -3' miRNA: 3'- -CGCGC--AGCGCGCGUGu-------------CGUUGugCCG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home