miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
24069	-	50051	89	27	-28.54	NP_944303		5' arm      3' arm
24096	-	58510	90	21.5	-25.1	NP_944303		5' arm      3' arm
24083	-	54791	89	20.5	-23.7	NP_944303		5' arm      3' arm
24074	-	52307	90	21	-20.4	NP_944303		5' arm      3' arm
24090	-	56802	87	19.5	-30	NP_944303		5' arm      3' arm
24075	-	52655	90	20.5	-21	NP_944303		5' arm      3' arm
24089	-	56684	90	21.5	-23.2	NP_944303		5' arm      3' arm
23953	+	50864	89	19.5	-33.9	NP_944303		5' arm      3' arm
23957	+	54373	86	19.5	-21.2	NP_944303		5' arm      3' arm
23951	+	49386	88	20.5	-31	NP_944303		5' arm      3' arm
23952	+	49953	84	19.5	-23.7	NP_944303		5' arm      3' arm
24067	-	48652	89	21.5	-24.9	NP_944303		5' arm      3' arm
23950	+	48725	77	19	-29.2	NP_944303		5' arm      3' arm
23954	+	52021	87	19.5	-22.1	NP_944303		5' arm      3' arm
24091	-	56933	89	20.5	-19.8	NP_944303		5' arm      3' arm
23955	+	52218	90	19.5	-24.7	NP_944303		5' arm      3' arm
24097	-	58762	89	21	-22.7	NP_944303		5' arm      3' arm
24072	-	51748	87	19	-21.1	NP_944303		5' arm      3' arm
24077	-	53530	84	20	-24.9	NP_944303		5' arm      3' arm
24076	-	53435	89	22.5	-32.2	NP_944303		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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