miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
13124	+	45548	90	23.5	-20.2	NP_570768		5' arm      3' arm
13107	+	18773	89	23.5	-26.2	NP_570752		5' arm      3' arm
13129	+	52483	89	23.5	-24.5	NP_570777		5' arm      3' arm
13098	+	6321	90	23	-22.4	NP_570747		5' arm      3' arm
13111	+	26669	89	23	-20.6			5' arm      3' arm
13260	-	116885	89	23	-30.4			5' arm      3' arm
13266	-	118740	89	23	-30.4	NP_598366		5' arm      3' arm
13120	+	30550	87	23	-26.2	NP_570759		5' arm      3' arm
13166	+	125872	88	23	-19.5	NP_570823		5' arm      3' arm
13170	+	128333	89	23	-21.7	NP_570823		5' arm      3' arm
13232	-	94533	84	23	-26.2	NP_570809		5' arm      3' arm
13238	-	104103	90	22.5	-24.7	NP_570812		5' arm      3' arm
13250	-	113265	90	22.5	-23.9			5' arm      3' arm
13162	+	121506	87	22.5	-20.9	NP_570820		5' arm      3' arm
13264	-	118414	90	22.5	-21.8			5' arm      3' arm
13114	+	27852	89	22.5	-21.7	NP_570757		5' arm      3' arm
13112	+	27160	89	22.5	-21.2	NP_570756		5' arm      3' arm
13179	-	6904	88	22.5	-27.7	NP_570747		5' arm      3' arm
13164	+	125239	90	22.5	-23.1	NP_570823		5' arm      3' arm
13118	+	29113	89	22.5	-20.3	NP_570758		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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