miRNA display CGI


Results 1 - 20 of 61 are showing below:
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GenBank Identifier RefSeq Acc. Name
18450236 NC_001132.2 Myxoma virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
1181 + 159519 90 25.5 -23.8 NP_051713 5' arm      3' arm
1182 - 2255 90 25.5 -23.8 NP_051879 5' arm      3' arm
1203 - 145501 90 25 -20.8 NP_051863       3' arm
1164 + 82031 89 24.5 -19.71 NP_051797 5' arm      3' arm
1191 - 10829 85 24 -21 NP_051870 5' arm      3' arm
1172 + 150945 85 24 -21 NP_051870 5' arm      3' arm
1171 + 150201 90 24 -24.79 NP_051869 5' arm      3' arm
1192 - 11573 90 24 -24.79 NP_051869 5' arm      3' arm
1167 + 136265 89 24 -27.6 NP_051854 5' arm      3' arm
1158 + 10495 87 23 -28.1 NP_051870 5' arm      3' arm
1169 + 139762 89 23 -21.5 NP_051858 5' arm      3' arm
1206 - 151279 87 23 -28.1 NP_051870 5' arm      3' arm
1162 + 44789 88 22.5 -20.6 NP_051758 5' arm      3' arm
1195 - 104559 89 22.5 -20.6 5' arm      3' arm
1177 + 157144 86 22.5 -24.1 NP_051716 5' arm      3' arm
1201 - 134716 90 22.5 -27.09 NP_051852 5' arm      3' arm
1166 + 134626 90 22.5 -24.19 NP_051852 5' arm      3' arm
1210 - 158287 90 22.5 -28.2 NP_051715 5' arm      3' arm
1212 - 161178 87 22.5 -23.5 5' arm      3' arm
1154 + 3487 90 22.5 -28.2 NP_051877 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.