miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
1157	+	6955	87	20.5	-21.2	NP_051719		5' arm      3' arm
1156	+	4983	89	20	-19.4	NP_051718		5' arm      3' arm
1158	+	10495	87	23	-28.1	NP_051870		5' arm      3' arm
1159	+	11234	73	21	-25.1	NP_051870		5' arm      3' arm
1165	+	127575	87	20.5	-19.8	NP_051848		5' arm      3' arm
1164	+	82031	89	24.5	-19.71	NP_051797		5' arm      3' arm
1163	+	45928	90	20	-29.9	NP_051758		5' arm      3' arm
1161	+	42384	82	20	-20	NP_051756		5' arm      3' arm
1162	+	44789	88	22.5	-20.6	NP_051758		5' arm      3' arm
1160	+	27102	88	19.5	-22	NP_051742		5' arm      3' arm
1203	-	145501	90	25	-20.8	NP_051863		3' arm
1205	-	150540	73	21	-25.1	NP_051722		5' arm      3' arm
1204	-	148441	89	21.5	-21.4	NP_051865		5' arm      3' arm
1206	-	151279	87	23	-28.1	NP_051870		5' arm      3' arm
1208	-	156791	89	20	-19.4	NP_051874		5' arm      3' arm
1207	-	154819	87	20.5	-21.2	NP_051873		5' arm      3' arm
1209	-	157720	87	20	-24.2	NP_051876		5' arm      3' arm
1211	-	159609	90	20	-23.9	NP_051879		5' arm      3' arm
1210	-	158287	90	22.5	-28.2	NP_051715		5' arm      3' arm
1184	-	3055	90	19.5	-24.5	NP_051714		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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