miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
1190	-	10708	90	20	-25.2	NP_051722		5' arm      3' arm
1194	-	89894	90	20	-24	NP_051805		5' arm      3' arm
1196	-	112242	89	21.5	-20.91	NP_051828		5' arm      3' arm
1188	-	5238	86	20.5	-20.1	NP_051718		5' arm      3' arm
1186	-	4630	86	22.5	-24.1	NP_051716		5' arm      3' arm
1199	-	127948	87	20	-23.6	NP_051848		5' arm
1185	-	3245	90	21	-23.7	NP_051714		5' arm      3' arm
1193	-	12991	90	20	-22.2	NP_051723		5' arm      3' arm
1195	-	104559	89	22.5	-20.6			5' arm      3' arm
1198	-	127664	90	21.5	-30.6	NP_051848		5' arm      3' arm
1187	-	5095	89	20	-19.6	NP_051874		5' arm      3' arm
1180	+	159232	83	21.5	-24.9	NP_051879		5' arm      3' arm
1181	+	159519	90	25.5	-23.8	NP_051713		5' arm      3' arm
1164	+	82031	89	24.5	-19.71	NP_051797		5' arm      3' arm
1163	+	45928	90	20	-29.9	NP_051758		5' arm      3' arm
1161	+	42384	82	20	-20	NP_051756		5' arm      3' arm
1176	+	156679	89	20	-19.6	NP_051874		5' arm      3' arm
1174	+	153698	87	22	-23.8	NP_051872		5' arm      3' arm
1177	+	157144	86	22.5	-24.1	NP_051716		5' arm      3' arm
1156	+	4983	89	20	-19.4	NP_051718		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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