miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
5553	+	13641	86	21	-22.3	NP_044606		5' arm      3' arm
5554	+	13907	90	23	-24.6	NP_044606		5' arm      3' arm
5555	+	16257	90	20	-30.6	NP_044607		5' arm      3' arm
5556	+	17282	88	21.5	-30.2	NP_044608		5' arm      3' arm
5557	+	17409	88	19	-21.8	NP_044608		5' arm      3' arm
5558	+	17912	73	22.5	-26.14	NP_044608		5' arm      3' arm
5559	+	18070	90	23	-26.5			5' arm      3' arm
5560	+	18770	85	20	-26.5	NP_044609		5' arm      3' arm
5561	+	19553	90	19.5	-24.1	NP_044609		5' arm      3' arm
5562	+	19684	79	21	-20.5	NP_044609		5' arm      3' arm
5563	+	20228	88	21	-31.4	NP_044609		5' arm      3' arm
5564	+	21047	88	19	-28.5	NP_044610		5' arm      3' arm
5565	+	21335	90	19	-24	NP_044610		5' arm      3' arm
5566	+	22194	90	19	-22.5	NP_044610		5' arm      3' arm
5567	+	23269	90	26	-24	NP_044611		5' arm      3' arm
5568	+	23700	89	22.5	-23	NP_044611		5' arm      3' arm
5569	+	24793	90	22	-27	NP_044612		5' arm      3' arm
5570	+	24968	89	21.5	-22.6	NP_044612		5' arm      3' arm
5571	+	25072	85	21	-28.2	NP_044613		5' arm      3' arm
5572	+	25171	89	21	-23.4	NP_044613		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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