miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
5999	-	145607	88	20.5	-20.7	NP_044675		5' arm      3' arm
5889	-	68330	90	22.5	-20.7	NP_044634		5' arm      3' arm
5691	+	92895	90	20	-20.8			5' arm      3' arm
5899	-	77402	87	21.5	-20.8	NP_044638		5' arm      3' arm
5645	+	66579	88	20	-20.8	NP_044633		5' arm      3' arm
5842	-	44004	89	19.5	-20.8	NP_044623		5' arm      3' arm
5698	+	96021	88	22.5	-20.8			5' arm      3' arm
5895	-	75300	90	20	-20.8	NP_044638		5' arm      3' arm
5815	-	22582	89	22.5	-20.8	NP_044610		5' arm      3' arm
5761	+	142123	89	20	-20.9	NP_044670		5' arm      3' arm
5846	-	45361	88	20.5	-21	NP_044623		5' arm      3' arm
5611	+	44161	79	19	-21	NP_044623		5' arm      3' arm
5641	+	63727	88	19.5	-21.1	NP_044632		5' arm      3' arm
5922	-	89370	89	24.5	-21.1	NP_044641		5' arm      3' arm
5904	-	80336	90	22.5	-21.1	NP_044638		5' arm      3' arm
5692	+	93375	90	19	-21.1	NP_044644		5' arm      3' arm
5908	-	81402	90	23	-21.11	NP_044639		5' arm      3' arm
5765	+	144329	88	19	-21.2	NP_044673		5' arm      3' arm
5654	+	74517	82	20.5	-21.3	NP_044638		5' arm      3' arm
5626	+	50676	86	22	-21.3			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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