miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
5140	+	26228	86	19	-27.7	NP_044481		5' arm      3' arm
5138	+	25674	87	19	-25.1	NP_044481		5' arm      3' arm
5143	+	28355	83	19	-21.6	NP_044483		5' arm      3' arm
5193	+	61525	89	19	-26.2	NP_044499		5' arm      3' arm
5148	+	32923	90	19	-25.9	NP_044486		5' arm      3' arm
5154	+	35461	89	19	-19.5	NP_044487		5' arm      3' arm
5114	+	11336	89	19	-22.4	NP_044472		5' arm      3' arm
5118	+	12829	88	19	-26	NP_044474		5' arm      3' arm
5131	+	20138	90	19	-27	NP_044477		5' arm      3' arm
5137	+	25428	88	19	-28	NP_044481		5' arm      3' arm
5158	+	39208	89	19	-22.59	NP_044488		5' arm      3' arm
5156	+	36956	90	19	-21.8	NP_044488		5' arm      3' arm
5183	+	51429	86	19	-26.8	NP_044495		5' arm      3' arm
5169	+	45459	89	19	-27.5	NP_044491		5' arm      3' arm
5121	+	14489	90	19	-21.7	NP_044474		5' arm      3' arm
5122	+	15348	80	19	-24.04	NP_044475		5' arm      3' arm
5106	+	5869	87	19	-26.4			5' arm      3' arm
5151	+	33903	87	19	-21.3	NP_044484		5' arm      3' arm
5141	+	27068	88	19	-21.1	NP_044482		5' arm      3' arm
5133	+	23384	70	19	-36.2	NP_044479		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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