miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
5491	-	134435	88	20.5	-22.4	NP_044531		5' arm      3' arm
5508	-	144578	90	19.5	-23.9	NP_044538		5' arm      3' arm
5519	-	149318	87	25.5	-33.9			5' arm      3' arm
5490	-	133807	90	21.5	-21.3	NP_044531		5' arm      3' arm
5521	-	150098	89	22	-28.5	NP_044544		5' arm      3' arm
5473	-	113386	90	19.5	-28.5	NP_044524		5' arm      3' arm
5515	-	147878	86	21	-20.49	NP_044543		5' arm      3' arm
5470	-	111195	90	21	-28.7	NP_044523		5' arm      3' arm
5468	-	110262	89	23	-27.7	NP_044523		5' arm      3' arm
5478	-	117491	88	20	-26.5	NP_044527		5' arm      3' arm
5480	-	117893	89	24	-27.9			5' arm      3' arm
5485	-	124076	87	19.5	-21.4	NP_044528		5' arm      3' arm
5493	-	135738	84	19	-22.14	NP_044532		5' arm      3' arm
5488	-	132741	82	26	-28.8			5' arm      3' arm
5497	-	138447	90	19.5	-22.7	NP_044534		5' arm      3' arm
5500	-	140412	90	21	-27.1	NP_044535		5' arm      3' arm
5502	-	141247	87	19.5	-24.7	NP_044536		5' arm      3' arm
5506	-	144000	90	21	-25.9	NP_044538		5' arm      3' arm
5517	-	148685	89	19	-25.6			5' arm      3' arm
5513	-	146813	90	20.5	-21.2	NP_044541		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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