miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
15658	+	51	86	21.5	-23.1			5' arm      3' arm
15659	+	278	90	26	-25.7			5' arm      3' arm
15660	+	384	88	21.5	-27.8			5' arm      3' arm
15661	+	564	90	27.5	-26.8	YP_214009		5' arm      3' arm
15662	+	1787	88	23.5	-21.7	YP_214010		5' arm      3' arm
15663	+	2049	88	21.5	-20.8			5' arm      3' arm
15664	+	6170	90	21.5	-21.3	YP_214014		5' arm      3' arm
15665	+	6636	90	21	-23.3	YP_214015		5' arm      3' arm
15666	+	7149	90	21.5	-23.7	YP_214015		5' arm      3' arm
15667	+	12373	88	21	-24.6	YP_214020		5' arm      3' arm
15668	+	17662	89	23	-28.4	YP_214026		5' arm      3' arm
15669	+	17807	87	21.5	-24.56	YP_214026		5' arm      3' arm
15670	+	18045	90	24.5	-30.3	YP_214026		5' arm      3' arm
15671	+	18554	90	21	-37.4	YP_214026		5' arm      3' arm
15672	+	18669	86	20	-21.9	YP_214026		5' arm      3' arm
15673	+	19339	88	21.5	-20.6	YP_214026		5' arm      3' arm
15674	+	19935	87	26	-22.2	YP_214026		5' arm      3' arm
15675	+	20875	88	21	-24.2	YP_214028		5' arm      3' arm
15676	+	24066	87	20	-20.4	YP_214031		5' arm      3' arm
15677	+	24785	87	19.5	-26.2	YP_214031		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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