miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
4184	-	153054	90	21.5	-29.2	NP_042884		5' arm      3' arm
4190	-	155593	89	21.5	-20.2			5' arm      3' arm
4150	+	9499	87	21.5	-24.8	NP_042893		5' arm      3' arm
4175	-	4360	89	21.5	-20.2			5' arm      3' arm
4168	-	1821	90	21.5	-29.2	NP_042884		5' arm      3' arm
4180	-	12651	89	21.5	-28.8	NP_042895		5' arm      3' arm
4179	-	9710	90	21	-21.2	NP_042893		5' arm      3' arm
4178	-	9586	89	21	-21.5	NP_042893		5' arm      3' arm
4157	+	134476	81	21	-21	NP_042982		5' arm      3' arm
4163	+	156024	85	20.5	-19.42	NP_042888		5' arm      3' arm
4145	+	4791	85	20.5	-19.42	NP_042888		5' arm      3' arm
4183	-	117925	90	20.5	-32.7			5' arm      3' arm
4176	-	9056	89	20	-25.9	NP_042893		5' arm      3' arm
4148	+	6573	89	20	-27.7	NP_043001		5' arm      3' arm
4182	-	25121	81	20	-25.8	NP_042906		5' arm      3' arm
4166	+	157806	89	20	-27.7	NP_042889		5' arm      3' arm
4171	-	3216	90	19.5	-19.6			5' arm      3' arm
4151	+	77696	90	19.5	-24.9	NP_042940		5' arm      3' arm
4149	+	7011	88	19.5	-23			5' arm      3' arm
4143	+	1412	88	19.5	-22.9	NP_042996		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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