miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
31298	+	517	90	23.5	-21.9			5' arm      3' arm
31299	+	658	88	25	-22.1			5' arm      3' arm
31300	+	1202	90	24.5	-26.7			5' arm      3' arm
31301	+	1411	90	20.5	-28.4			5' arm      3' arm
31302	+	1581	90	23.5	-26.8			5' arm      3' arm
31303	+	1704	90	25.5	-30.3			5' arm      3' arm
31304	+	1904	82	24.5	-25.6			5' arm      3' arm
31305	+	2155	89	24	-28.3			5' arm      3' arm
31306	+	2310	86	23.5	-23.5			5' arm      3' arm
31307	+	2459	89	26	-31.6			5' arm      3' arm
31308	+	2699	89	23.5	-21.53			5' arm      3' arm
31309	+	2805	90	24.5	-23.6			5' arm      3' arm
31310	+	4314	90	22.5	-23.5			5' arm      3' arm
31311	+	7945	88	23.5	-32.8			5' arm      3' arm
31312	+	8789	88	21.5	-20.9			5' arm      3' arm
31313	+	12164	89	20.5	-25.7			5' arm      3' arm
31314	+	24208	89	22.5	-26.3	YP_182345		5' arm      3' arm
31315	+	25091	89	21.5	-33.2			5' arm      3' arm
31316	+	25437	90	19	-22.2	YP_182346		5' arm      3' arm
31317	+	26890	90	22	-22.7	YP_182347		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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