miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
27314	-	9693	89	21	-22			5' arm      3' arm
27310	+	92589	89	22	-22.1	YP_006576		5' arm      3' arm
27285	+	8197	85	19	-22.2			5' arm      3' arm
27309	+	90952	89	21.5	-22.2	YP_006575		5' arm      3' arm
27300	+	48802	89	22	-22.3	YP_006515		5' arm      3' arm
27306	+	70699	90	22	-22.4	YP_006541		5' arm      3' arm
27321	-	31213	90	19.5	-22.4	YP_006497		5' arm      3' arm
27316	-	18808	90	24	-22.5	YP_006480		5' arm      3' arm
27287	+	10101	85	20.5	-22.56	YP_006478		5' arm      3' arm
27326	-	40848	86	25	-22.9	YP_006506		5' arm      3' arm
27305	+	69060	89	25	-23.5			5' arm      3' arm
27319	-	30683	88	22	-23.7	YP_006496		5' arm      3' arm
27291	+	17738	89	21.5	-24.5	YP_006480		5' arm      3' arm
27298	+	48283	86	19.5	-24.9			5' arm      3' arm
27322	-	32332	89	21.5	-24.9	YP_006502		5' arm      3' arm
27297	+	36373	89	21.5	-24.9	YP_006502		5' arm      3' arm
27308	+	79641	85	22.5	-25	YP_006554		5' arm      3' arm
27301	+	50599	90	20.5	-25.8	YP_006517		5' arm      3' arm
27324	-	34375	88	20	-25.9			5' arm      3' arm
27320	-	30865	64	21	-26.5	YP_006496		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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