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GenBank Identifier | RefSeq Acc. | Name |
53869480 | NC_005345.2 | Bacteriophage VWB virion |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
26253 | + | 437 | 90 | 19.5 | -21 | YP_115515 | 5' arm 3' arm | ||
26254 | + | 641 | 90 | 21.5 | -24.5 | YP_115515 | 5' arm 3' arm | ||
26255 | + | 1481 | 90 | 19.5 | -21.3 | 5' arm 3' arm | |||
26256 | + | 1860 | 89 | 22.5 | -19.5 | 5' arm 3' arm | |||
26257 | + | 2056 | 89 | 22 | -23.8 | NP_958243 | 5' arm 3' arm | ||
26258 | + | 2192 | 90 | 19.5 | -23 | NP_958243 | 5' arm 3' arm | ||
26259 | + | 2304 | 81 | 19 | -21.2 | 5' arm 3' arm | |||
26260 | + | 3471 | 88 | 21.5 | -23 | 5' arm 3' arm | |||
26261 | + | 4845 | 90 | 21 | -24.5 | NP_958248 | 5' arm 3' arm | ||
26262 | + | 5054 | 89 | 20 | -26.7 | NP_958248 | 5' arm 3' arm | ||
26263 | + | 6409 | 90 | 19 | -23.3 | NP_958251 | 5' arm 3' arm | ||
26264 | + | 6513 | 87 | 21.5 | -20.2 | NP_958251 | 5' arm 3' arm | ||
26265 | + | 6756 | 89 | 22 | -22.7 | NP_958251 | 5' arm 3' arm | ||
26266 | + | 7392 | 90 | 20 | -20.7 | NP_958252 | 5' arm 3' arm | ||
26267 | + | 7937 | 89 | 21.5 | -28.3 | NP_958252 | 5' arm 3' arm | ||
26268 | + | 8617 | 88 | 22 | -23.9 | 5' arm 3' arm | |||
26269 | + | 9091 | 90 | 21 | -19.7 | NP_958254 | 5' arm 3' arm | ||
26270 | + | 9374 | 90 | 20.5 | -29.3 | NP_958254 | 5' arm 3' arm | ||
26271 | + | 11044 | 89 | 21 | -23.2 | NP_958257 | 5' arm 3' arm | ||
26272 | + | 12543 | 87 | 25 | -27.2 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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