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GenBank Identifier | RefSeq Acc. | Name |
38229112 | NC_005178.1 | Bacteriophage D3112 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
23022 | + | 1966 | 90 | 19.5 | -25 | NP_938211 | 5' arm 3' arm | ||
23023 | + | 3459 | 89 | 21 | -23.5 | NP_938213 | 5' arm 3' arm | ||
23024 | + | 3782 | 89 | 19 | -22.3 | NP_938213 | 5' arm 3' arm | ||
23025 | + | 5233 | 82 | 20 | -19.4 | NP_938214 | 5' arm 3' arm | ||
23026 | + | 6128 | 90 | 20 | -26.2 | NP_938216 | 5' arm 3' arm | ||
23027 | + | 6781 | 90 | 21 | -20.2 | NP_938217 | 5' arm 3' arm | ||
23028 | + | 8185 | 83 | 20 | -22.9 | NP_938220 | 5' arm 3' arm | ||
23029 | + | 8868 | 90 | 19.5 | -23.2 | NP_938222 | 5' arm 3' arm | ||
23030 | + | 10439 | 81 | 20 | -19.7 | NP_938226 | 5' arm 3' arm | ||
23031 | + | 11381 | 89 | 23.5 | -29.2 | NP_938227 | 5' arm 3' arm | ||
23032 | + | 12924 | 90 | 21 | -28.7 | NP_938231 | 5' arm 3' arm | ||
23033 | + | 13540 | 90 | 22.5 | -26.9 | NP_938232 | 5' arm 3' arm | ||
23034 | + | 15050 | 89 | 20.5 | -24.2 | NP_938233 | 5' arm 3' arm | ||
23035 | + | 15411 | 75 | 21 | -24.1 | 5' arm 3' arm | |||
23036 | + | 16564 | 90 | 19.5 | -21.7 | NP_938234 | 5' arm 3' arm | ||
23037 | + | 16751 | 90 | 22 | -27.3 | NP_938234 | 5' arm 3' arm | ||
23038 | + | 18135 | 90 | 24 | -20.7 | NP_938235 | 5' arm 3' arm | ||
23039 | + | 18792 | 90 | 20.5 | -28.6 | 5' arm 3' arm | |||
23040 | + | 22135 | 89 | 20 | -22.1 | NP_938242 | 5' arm 3' arm | ||
23041 | + | 22288 | 89 | 20 | -24.9 | NP_938243 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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