miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
2338	+	7068	89	19	-23.3	NP_040587		5' arm      3' arm
2374	-	6477	89	21	-22.7	NP_040587		5' arm      3' arm
2336	+	5876	89	20	-19.6	NP_040586		5' arm      3' arm
2373	-	5616	89	20	-20.9	NP_040585		5' arm      3' arm
2371	-	5167	88	21	-25.4	NP_040584		5' arm      3' arm
2372	-	5468	89	21	-22.3	NP_040584		5' arm      3' arm
2370	-	4771	90	20.5	-27.1	NP_040584		5' arm      3' arm
2335	+	5641	84	19.5	-23.4	NP_040584		5' arm      3' arm
2334	+	4870	89	19.5	-23.2	NP_040584		5' arm      3' arm
2368	-	3399	82	20.5	-22.9	NP_040583		5' arm      3' arm
2367	-	3089	86	19	-21.4	NP_040583		5' arm      3' arm
2333	+	4311	83	19	-22.6	NP_040583		5' arm      3' arm
2331	+	3566	89	21	-29.1	NP_040583		5' arm      3' arm
2330	+	3412	89	21.5	-29.3	NP_040583		5' arm      3' arm
2369	-	3652	88	22.5	-28.6	NP_040583		5' arm      3' arm
2332	+	3993	90	24	-24.4	NP_040583		5' arm      3' arm
2366	-	1404	77	19.5	-24.3	NP_040581		5' arm      3' arm
2328	+	1307	88	19.5	-22.9	NP_040581		5' arm      3' arm
2329	+	2478	90	21.5	-26.1	NP_040581		5' arm      3' arm
2327	+	266	78	21	-26.2	NP_040580		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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