miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
2359	+	24134	90	23	-24.6			5' arm      3' arm
2339	+	7510	90	21	-24.7	NP_040588		5' arm      3' arm
2337	+	6875	84	20.5	-24.8	NP_040587		5' arm      3' arm
2364	+	46874	90	19.5	-25.23			5' arm      3' arm
2349	+	14329	89	20.5	-25.4	NP_040598		5' arm      3' arm
2371	-	5167	88	21	-25.4	NP_040584		5' arm      3' arm
2345	+	12646	90	22.5	-25.5	NP_040595		5' arm      3' arm
2384	-	17039	88	19	-25.7	NP_040600		5' arm      3' arm
2329	+	2478	90	21.5	-26.1	NP_040581		5' arm      3' arm
2327	+	266	78	21	-26.2	NP_040580		5' arm      3' arm
2392	-	46380	86	23.5	-26.3	NP_040646		5' arm      3' arm
2356	+	18594	84	22.5	-26.9	NP_040600		5' arm      3' arm
2350	+	14592	90	21.5	-27	NP_040598		5' arm      3' arm
2361	+	36332	90	21	-27	NP_040627		5' arm      3' arm
2388	-	39110	90	21.5	-27.1	NP_040631		5' arm      3' arm
2370	-	4771	90	20.5	-27.1	NP_040584		5' arm      3' arm
2391	-	44792	86	22.5	-27.2	NP_040643		5' arm      3' arm
2377	-	11419	88	19.5	-28.1	NP_040595		5' arm      3' arm
2369	-	3652	88	22.5	-28.6	NP_040583		5' arm      3' arm
2385	-	18391	87	24	-28.7	NP_040600		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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