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| GenBank Identifier | RefSeq Acc. | Name |
| 18640469 | NC_003390.1 | Cyanophage P60 |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 13048 | + | 44225 | 90 | 20 | -25.8 | NP_570385 | 5' arm 3' arm | ||
| 13082 | - | 44187 | 89 | 19.5 | -25.4 | NP_570384 | 5' arm 3' arm | ||
| 13081 | - | 44089 | 87 | 22 | -21.4 | NP_570384 | 5' arm 3' arm | ||
| 13080 | - | 43560 | 87 | 21.5 | -22.8 | NP_570383 | 5' arm 3' arm | ||
| 13079 | - | 42641 | 88 | 20 | -36 | NP_570379 | 5' arm 3' arm | ||
| 13047 | + | 42552 | 89 | 21 | -23.1 | NP_570379 | 5' arm 3' arm | ||
| 13078 | - | 41365 | 87 | 19.5 | -22.9 | NP_570375 | 5' arm 3' arm | ||
| 13046 | + | 39465 | 86 | 21 | -20.6 | NP_570370 | 5' arm 3' arm | ||
| 13045 | + | 38801 | 86 | 20.5 | -19.9 | NP_570369 | 5' arm 3' arm | ||
| 13042 | + | 37793 | 89 | 20 | -22 | NP_570367 | 5' arm 3' arm | ||
| 13077 | - | 38064 | 87 | 20 | -22.7 | NP_570367 | 5' arm 3' arm | ||
| 13043 | + | 37912 | 86 | 21 | -22.1 | NP_570367 | 5' arm 3' arm | ||
| 13044 | + | 38305 | 88 | 23 | -22.5 | NP_570367 | 5' arm 3' arm | ||
| 13076 | - | 37881 | 90 | 24 | -25.9 | NP_570367 | 5' arm 3' arm | ||
| 13074 | - | 35915 | 88 | 21 | -23.3 | NP_570364 | 5' arm 3' arm | ||
| 13075 | - | 36023 | 88 | 19 | -24.2 | NP_570364 | 5' arm 3' arm | ||
| 13040 | + | 33420 | 87 | 19.5 | -22.1 | NP_570361 | 5' arm 3' arm | ||
| 13039 | + | 32347 | 90 | 21 | -22.7 | NP_570359 | 5' arm 3' arm | ||
| 13037 | + | 29437 | 90 | 25.5 | -24.7 | NP_570352 | 5' arm 3' arm | ||
| 13038 | + | 29533 | 90 | 21 | -21.5 | NP_570352 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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