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GenBank Identifier | RefSeq Acc. | Name |
56692568 | NC_006548.1 | Bacteriophage B3 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
30576 | - | 38326 | 89 | 19.5 | -21.2 | YP_164095 | 5' arm 3' arm | ||
30575 | - | 37765 | 90 | 23 | -25.8 | YP_164094 | 5' arm 3' arm | ||
30574 | - | 37015 | 89 | 21 | -29 | YP_164093 | 5' arm 3' arm | ||
30573 | - | 36861 | 86 | 21 | -28.1 | YP_164093 | 5' arm 3' arm | ||
30572 | - | 36473 | 90 | 20 | -21 | YP_164093 | 5' arm 3' arm | ||
30571 | - | 36209 | 89 | 20 | -30.3 | YP_164093 | 5' arm 3' arm | ||
30570 | - | 35843 | 89 | 19.5 | -20.7 | YP_164093 | 5' arm 3' arm | ||
30569 | - | 35080 | 90 | 20 | -25 | YP_164092 | 5' arm 3' arm | ||
30568 | - | 34726 | 90 | 21 | -24.2 | YP_164092 | 5' arm 3' arm | ||
30567 | - | 33961 | 87 | 22 | -25.6 | YP_164090 | 5' arm 3' arm | ||
30566 | - | 33668 | 89 | 19.5 | -22.9 | YP_164089 | 5' arm 3' arm | ||
30565 | - | 33096 | 86 | 20.5 | -23.9 | YP_164089 | 5' arm 3' arm | ||
30564 | - | 32797 | 84 | 19.5 | -21.4 | YP_164089 | 5' arm 3' arm | ||
30563 | - | 32411 | 88 | 24.5 | -27.6 | YP_164089 | 5' arm 3' arm | ||
30562 | - | 31043 | 88 | 20 | -19.8 | YP_164087 | 5' arm 3' arm | ||
30561 | - | 30447 | 87 | 21.5 | -27.7 | YP_164087 | 5' arm 3' arm | ||
30560 | - | 29929 | 87 | 19 | -22.5 | YP_164086 | 5' arm 3' arm | ||
30559 | - | 29604 | 90 | 19.5 | -19.4 | YP_164086 | 5' arm 3' arm | ||
30558 | - | 29336 | 89 | 22.5 | -24.6 | YP_164086 | 5' arm 3' arm | ||
30557 | - | 29246 | 89 | 21 | -27.1 | YP_164086 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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