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GenBank Identifier | RefSeq Acc. | Name |
56692568 | NC_006548.1 | Bacteriophage B3 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
30556 | - | 28963 | 85 | 20.5 | -25.4 | YP_164086 | 5' arm 3' arm | ||
30555 | - | 28829 | 89 | 21.5 | -23.4 | YP_164086 | 5' arm 3' arm | ||
30554 | - | 28601 | 90 | 20 | -25.7 | YP_164086 | 5' arm 3' arm | ||
30553 | - | 28150 | 85 | 25 | -35.9 | YP_164086 | 5' arm 3' arm | ||
30552 | - | 27927 | 90 | 20 | -21.5 | YP_164086 | 5' arm 3' arm | ||
30551 | - | 27809 | 89 | 20 | -23.2 | YP_164086 | 5' arm 3' arm | ||
30550 | - | 27523 | 90 | 22.5 | -25.8 | YP_164086 | 5' arm 3' arm | ||
30549 | - | 27240 | 89 | 23 | -27.2 | YP_164086 | 5' arm 3' arm | ||
30548 | - | 27081 | 88 | 21.5 | -32 | YP_164086 | 5' arm 3' arm | ||
30547 | - | 26918 | 89 | 22.5 | -21 | 5' arm 3' arm | |||
30546 | - | 25814 | 89 | 24 | -26.2 | YP_164083 | 5' arm 3' arm | ||
30545 | - | 25561 | 90 | 20 | -32.5 | YP_164081 | 5' arm 3' arm | ||
30544 | - | 25166 | 89 | 21.5 | -24.8 | YP_164081 | 5' arm 3' arm | ||
30543 | - | 25071 | 90 | 21 | -20.6 | YP_164080 | 5' arm 3' arm | ||
30542 | - | 24435 | 85 | 21 | -26 | YP_164080 | 5' arm 3' arm | ||
30541 | - | 23943 | 90 | 24 | -31.4 | YP_164078 | 5' arm 3' arm | ||
30540 | - | 23836 | 90 | 21 | -31.1 | YP_164078 | 5' arm 3' arm | ||
30539 | - | 23598 | 88 | 20 | -31.7 | YP_164077 | 5' arm 3' arm | ||
30538 | - | 22683 | 89 | 20 | -23 | YP_164076 | 5' arm 3' arm | ||
30537 | - | 22579 | 86 | 21.5 | -20.3 | YP_164076 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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