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| GenBank Identifier | RefSeq Acc. | Name |
| 18653809 | NC_003401.1 | Cercopithecine herpesvirus 17 |
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ID
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strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 13251 | - | 113405 | 89 | 25.5 | -22.2 | 5' arm 3' arm | |||
| 13250 | - | 113265 | 90 | 22.5 | -23.9 | 5' arm 3' arm | |||
| 13249 | - | 113152 | 89 | 28 | -32.7 | 5' arm 3' arm | |||
| 13248 | - | 111524 | 89 | 20.5 | -29.02 | NP_570816 | 5' arm 3' arm | ||
| 13247 | - | 109179 | 89 | 20.5 | -26.2 | NP_570814 | 5' arm 3' arm | ||
| 13246 | - | 107779 | 83 | 21 | -28.7 | NP_570813 | 5' arm 3' arm | ||
| 13245 | - | 107402 | 85 | 21.5 | -24.1 | NP_570812 | 5' arm 3' arm | ||
| 13244 | - | 107043 | 89 | 21.5 | -22.6 | NP_570812 | 5' arm 3' arm | ||
| 13243 | - | 106911 | 89 | 21 | -26.5 | NP_570812 | 5' arm 3' arm | ||
| 13242 | - | 106014 | 84 | 21 | -22.7 | NP_570812 | 5' arm 3' arm | ||
| 13241 | - | 105460 | 90 | 21.5 | -20.5 | NP_570812 | 5' arm 3' arm | ||
| 13240 | - | 105152 | 89 | 24 | -22.1 | NP_570812 | 5' arm 3' arm | ||
| 13239 | - | 104858 | 90 | 22.5 | -21.7 | NP_570812 | 5' arm 3' arm | ||
| 13238 | - | 104103 | 90 | 22.5 | -24.7 | NP_570812 | 5' arm 3' arm | ||
| 13237 | - | 103285 | 89 | 24.5 | -21 | NP_570812 | 5' arm 3' arm | ||
| 13236 | - | 102141 | 88 | 24.5 | -20.7 | NP_570812 | 5' arm 3' arm | ||
| 13235 | - | 100113 | 88 | 19.5 | -21.4 | NP_570812 | 5' arm 3' arm | ||
| 13234 | - | 97715 | 86 | 26 | -19.8 | NP_570811 | 5' arm 3' arm | ||
| 13233 | - | 95642 | 90 | 22 | -20.9 | NP_570809 | 5' arm 3' arm | ||
| 13232 | - | 94533 | 84 | 23 | -26.2 | NP_570809 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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