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| GenBank Identifier | RefSeq Acc. | Name |
| 18653809 | NC_003401.1 | Cercopithecine herpesvirus 17 |
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ID
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strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 13231 | - | 89746 | 90 | 22 | -20.3 | NP_570805 | 5' arm 3' arm | ||
| 13230 | - | 89000 | 90 | 19 | -28.5 | NP_570804 | 5' arm 3' arm | ||
| 13229 | - | 85824 | 88 | 20.5 | -26.9 | NP_570802 | 5' arm 3' arm | ||
| 13228 | - | 85463 | 89 | 21 | -26.71 | NP_570802 | 5' arm 3' arm | ||
| 13227 | - | 78238 | 84 | 19.5 | -22.4 | NP_570797 | 5' arm 3' arm | ||
| 13226 | - | 77721 | 88 | 21 | -27.5 | NP_570797 | 5' arm 3' arm | ||
| 13225 | - | 72633 | 85 | 20.5 | -19.5 | NP_570792 | 5' arm 3' arm | ||
| 13224 | - | 72011 | 89 | 21 | -24.7 | NP_598361 | 5' arm 3' arm | ||
| 13223 | - | 69744 | 87 | 22 | -29.9 | NP_570791 | 5' arm 3' arm | ||
| 13222 | - | 69541 | 88 | 21.5 | -24.6 | NP_570791 | 5' arm 3' arm | ||
| 13221 | - | 63930 | 90 | 19 | -22.7 | NP_570786 | 5' arm 3' arm | ||
| 13220 | - | 62684 | 90 | 21 | -20.17 | NP_570785 | 5' arm 3' arm | ||
| 13219 | - | 57876 | 90 | 19.5 | -21.8 | NP_570781 | 5' arm 3' arm | ||
| 13218 | - | 56809 | 89 | 21.5 | -22.13 | NP_570781 | 5' arm 3' arm | ||
| 13217 | - | 48339 | 87 | 20.5 | -21.2 | NP_570772 | 5' arm 3' arm | ||
| 13216 | - | 44807 | 90 | 23.5 | -27.14 | NP_570767 | 5' arm 3' arm | ||
| 13215 | - | 43248 | 88 | 19 | -28.9 | NP_570765 | 5' arm 3' arm | ||
| 13214 | - | 42072 | 90 | 19 | -26.6 | NP_570765 | 5' arm 3' arm | ||
| 13213 | - | 41847 | 90 | 19.5 | -21.2 | NP_570765 | 5' arm 3' arm | ||
| 13212 | - | 41052 | 88 | 20.5 | -25.1 | NP_570765 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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