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| GenBank Identifier | RefSeq Acc. | Name |
| 29566193 | NC_004684.1 | Mycobacteriophage Rosebush virion |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 19255 | - | 61289 | 89 | 19 | -29.5 | NP_817837 | 5' arm 3' arm | ||
| 19253 | - | 60929 | 86 | 20.5 | -20.2 | NP_817836 | 5' arm 3' arm | ||
| 19252 | - | 60626 | 88 | 21.5 | -23.6 | NP_817835 | 5' arm 3' arm | ||
| 19105 | + | 60125 | 90 | 20.5 | -30.4 | NP_817834 | 5' arm 3' arm | ||
| 19251 | - | 60087 | 85 | 19.5 | -25.3 | NP_817833 | 5' arm 3' arm | ||
| 19250 | - | 59899 | 90 | 22.5 | -22.8 | NP_817832 | 5' arm 3' arm | ||
| 19104 | + | 59276 | 88 | 27.5 | -32.8 | NP_817831 | 5' arm 3' arm | ||
| 19249 | - | 59362 | 89 | 21 | -34 | NP_817831 | 5' arm 3' arm | ||
| 19103 | + | 59141 | 90 | 21.5 | -28.8 | NP_817831 | 5' arm 3' arm | ||
| 19101 | + | 58826 | 86 | 20.5 | -22.7 | NP_817830 | 5' arm 3' arm | ||
| 19102 | + | 59007 | 85 | 20.5 | -27.4 | NP_817830 | 5' arm 3' arm | ||
| 19099 | + | 58329 | 90 | 21.5 | -29.9 | NP_817829 | 5' arm 3' arm | ||
| 19248 | - | 58315 | 89 | 23.5 | -24.9 | NP_817829 | 5' arm 3' arm | ||
| 19247 | - | 58161 | 87 | 20.5 | -21.2 | NP_817829 | 5' arm 3' arm | ||
| 19246 | - | 57807 | 88 | 21 | -23.5 | NP_817828 | 5' arm 3' arm | ||
| 19245 | - | 57718 | 84 | 21.5 | -25.4 | NP_817828 | 5' arm 3' arm | ||
| 19244 | - | 57587 | 88 | 20 | -21.2 | NP_817828 | 5' arm 3' arm | ||
| 19243 | - | 57201 | 90 | 21 | -24 | NP_817827 | 5' arm 3' arm | ||
| 19097 | + | 57025 | 82 | 21 | -26.4 | NP_817827 | 5' arm 3' arm | ||
| 19096 | + | 56529 | 86 | 19.5 | -33.3 | NP_817826 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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