miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
19060	+	44722	89	23.5	-20.1	NP_817810		5' arm      3' arm
19124	-	2273	86	23.5	-20.2	NP_817764		5' arm      3' arm
19253	-	60929	86	20.5	-20.2	NP_817836		5' arm      3' arm
19090	+	54856	90	21	-20.3	NP_817823		5' arm      3' arm
19262	-	67294	88	19	-20.3	NP_817851		5' arm      3' arm
19069	+	47559	90	23.5	-20.3	NP_817814		5' arm      3' arm
19107	+	62139	90	20	-20.4	NP_817840		5' arm      3' arm
19064	+	45935	89	20	-20.4	NP_817811		5' arm      3' arm
19239	-	55628	81	21	-20.4	NP_817824		5' arm      3' arm
19137	-	10499	89	21.5	-20.4	NP_817774		5' arm      3' arm
19161	-	20343	87	22	-20.5	NP_817786		5' arm      3' arm
19175	-	25571	88	20	-20.5	NP_817790		5' arm      3' arm
19019	+	27120	89	21	-20.5	NP_817790		5' arm      3' arm
19211	-	38794	89	21.5	-20.6	NP_817803		5' arm      3' arm
19121	-	263	89	23	-20.6	NP_817762		5' arm      3' arm
19117	+	65534	89	22.5	-20.7	NP_817847		5' arm      3' arm
19055	+	41882	90	20	-20.7	NP_817807		5' arm      3' arm
19120	+	67370	86	20.5	-20.7			5' arm      3' arm
19152	-	15731	89	21.5	-20.7	NP_817778		5' arm      3' arm
19150	-	15420	87	21.5	-20.7	NP_817777		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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