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| GenBank Identifier | RefSeq Acc. | Name |
| 29566737 | NC_004688.1 | Mycobacteriophage Omega virion |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 20714 | - | 81395 | 85 | 19.5 | -19.4 | NP_818455 | 5' arm 3' arm | ||
| 20470 | + | 37995 | 85 | 23.5 | -19.4 | NP_818344 | 5' arm 3' arm | ||
| 20456 | + | 32939 | 88 | 19 | -19.4 | NP_818339 | 5' arm 3' arm | ||
| 20736 | - | 96075 | 76 | 20.5 | -19.4 | NP_818493 | 3' arm | ||
| 20724 | - | 88222 | 90 | 22.5 | -19.4 | NP_818471 | 5' arm 3' arm | ||
| 20694 | - | 72577 | 87 | 20.5 | -19.5 | NP_818437 | 5' arm 3' arm | ||
| 20424 | + | 14552 | 89 | 22.5 | -19.6 | NP_818321 | 5' arm 3' arm | ||
| 20554 | + | 97367 | 87 | 20 | -19.6 | NP_818497 | 5' arm 3' arm | ||
| 20619 | - | 23443 | 90 | 22 | -19.6 | NP_818335 | 5' arm 3' arm | ||
| 20674 | - | 55916 | 87 | 19 | -19.6 | NP_818388 | 5' arm 3' arm | ||
| 20683 | - | 63445 | 89 | 21.5 | -19.66 | NP_818412 | 5' arm 3' arm | ||
| 20643 | - | 41757 | 87 | 19.5 | -19.7 | NP_818351 | 5' arm 3' arm | ||
| 20688 | - | 67554 | 78 | 19.5 | -19.7 | NP_818424 | 5' arm 3' arm | ||
| 20568 | + | 102389 | 90 | 24.5 | -19.7 | NP_818509 | 5' arm 3' arm | ||
| 20463 | + | 36017 | 87 | 24 | -19.8 | NP_818341 | 5' arm 3' arm | ||
| 20504 | + | 66160 | 89 | 20 | -19.82 | NP_818421 | 5' arm 3' arm | ||
| 20460 | + | 34515 | 90 | 23 | -19.9 | NP_818340 | 5' arm 3' arm | ||
| 20449 | + | 29881 | 87 | 19 | -19.9 | NP_818337 | 5' arm 3' arm | ||
| 20693 | - | 71535 | 87 | 19.5 | -19.9 | NP_818435 | 5' arm 3' arm | ||
| 20454 | + | 32425 | 87 | 20.5 | -19.9 | NP_818339 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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