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| GenBank Identifier | RefSeq Acc. | Name |
| 47777280 | NC_005263.2 | Burkholderia cenocepacia phage Bcep1 |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 24316 | - | 40847 | 90 | 21 | -22.9 | NP_944368 | 5' arm 3' arm | ||
| 24220 | + | 41378 | 88 | 19.5 | -27.6 | NP_944368 | 5' arm 3' arm | ||
| 24317 | - | 40945 | 90 | 20 | -19.9 | NP_944368 | 5' arm 3' arm | ||
| 24319 | - | 42393 | 89 | 19 | -20.7 | NP_944368 | 5' arm 3' arm | ||
| 24221 | + | 41495 | 89 | 19 | -28.3 | NP_944368 | 5' arm 3' arm | ||
| 24318 | - | 42241 | 87 | 19.5 | -24.2 | NP_944368 | 5' arm 3' arm | ||
| 24222 | + | 42123 | 85 | 21 | -23.4 | NP_944368 | 5' arm 3' arm | ||
| 24217 | + | 40234 | 83 | 20 | -20.4 | NP_944367 | 5' arm 3' arm | ||
| 24314 | - | 40196 | 87 | 23.5 | -21 | NP_944366 | 5' arm 3' arm | ||
| 24216 | + | 39586 | 85 | 25 | -20.3 | NP_944364 | 5' arm 3' arm | ||
| 24213 | + | 38469 | 86 | 21 | -28.3 | NP_944363 | 5' arm 3' arm | ||
| 24209 | + | 37586 | 88 | 23.5 | -27.5 | NP_944363 | 5' arm 3' arm | ||
| 24311 | - | 38944 | 88 | 22 | -22.8 | NP_944363 | 5' arm 3' arm | ||
| 24312 | - | 39073 | 89 | 24.5 | -21.7 | NP_944363 | 5' arm 3' arm | ||
| 24214 | + | 38582 | 87 | 20.5 | -24.3 | NP_944363 | 5' arm 3' arm | ||
| 24208 | + | 37454 | 86 | 19.5 | -28.5 | NP_944363 | 5' arm 3' arm | ||
| 24215 | + | 39079 | 89 | 19 | -26.2 | NP_944363 | 5' arm 3' arm | ||
| 24207 | + | 37166 | 90 | 20.5 | -22.2 | NP_944363 | 5' arm 3' arm | ||
| 24211 | + | 37881 | 88 | 20.5 | -24.6 | NP_944363 | 5' arm 3' arm | ||
| 24313 | - | 39276 | 90 | 22.5 | -23.7 | NP_944363 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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