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| GenBank Identifier | RefSeq Acc. | Name |
| 11038431 | NC_001875.2 | Orgyia pseudotsugata multicapsid nucleopolyhedrovirus |
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ID
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strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 6787 | + | 57220 | 90 | 20.5 | -29.2 | NP_046226 | 5' arm 3' arm | ||
| 6788 | + | 57947 | 90 | 22.5 | -29.9 | NP_046227 | 5' arm 3' arm | ||
| 6789 | + | 58795 | 87 | 20 | -27.8 | NP_046227 | 5' arm 3' arm | ||
| 6790 | + | 59089 | 85 | 20 | -21.3 | NP_046227 | 5' arm 3' arm | ||
| 6791 | + | 59945 | 85 | 20.5 | -21.4 | NP_046227 | 5' arm 3' arm | ||
| 6792 | + | 60910 | 86 | 19 | -21.3 | NP_046228 | 5' arm 3' arm | ||
| 6793 | + | 61585 | 90 | 22.5 | -22.7 | NP_046229 | 5' arm 3' arm | ||
| 6794 | + | 61927 | 90 | 28.5 | -36.5 | NP_046229 | 5' arm 3' arm | ||
| 6795 | + | 62522 | 89 | 24 | -25.8 | NP_046230 | 5' arm 3' arm | ||
| 6796 | + | 64259 | 85 | 20 | -20.2 | NP_046235 | 5' arm 3' arm | ||
| 6797 | + | 64801 | 89 | 23 | -28.6 | NP_046236 | 5' arm 3' arm | ||
| 6798 | + | 65233 | 87 | 20 | -20.3 | NP_046236 | 5' arm 3' arm | ||
| 6799 | + | 66047 | 86 | 21 | -26.7 | NP_046238 | 5' arm 3' arm | ||
| 6800 | + | 66602 | 88 | 23.5 | -21.1 | NP_046239 | 5' arm 3' arm | ||
| 6801 | + | 66775 | 88 | 19 | -24.3 | NP_046239 | 5' arm 3' arm | ||
| 6802 | + | 67245 | 87 | 23 | -25 | NP_046239 | 5' arm 3' arm | ||
| 6803 | + | 69057 | 84 | 20.5 | -31.1 | NP_046242 | 5' arm 3' arm | ||
| 6804 | + | 69493 | 88 | 24.5 | -26.7 | NP_046242 | 5' arm 3' arm | ||
| 6805 | + | 69687 | 88 | 21 | -22.7 | NP_046242 | 5' arm 3' arm | ||
| 6806 | + | 69844 | 90 | 19.5 | -20.7 | NP_046242 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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