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| GenBank Identifier | RefSeq Acc. | Name |
| 11038431 | NC_001875.2 | Orgyia pseudotsugata multicapsid nucleopolyhedrovirus |
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ID
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strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 6767 | + | 39610 | 88 | 22.5 | -19.6 | NP_046206 | 5' arm 3' arm | ||
| 6768 | + | 40266 | 89 | 19 | -28.7 | NP_046206 | 5' arm 3' arm | ||
| 6769 | + | 40489 | 90 | 19.5 | -22.2 | NP_046206 | 5' arm 3' arm | ||
| 6770 | + | 41313 | 90 | 19.5 | -22.4 | NP_046206 | 5' arm 3' arm | ||
| 6771 | + | 41748 | 88 | 21 | -22.76 | NP_046207 | 5' arm 3' arm | ||
| 6772 | + | 41863 | 84 | 20.5 | -25.3 | NP_046207 | 5' arm 3' arm | ||
| 6773 | + | 42189 | 89 | 20.5 | -28.3 | NP_046208 | 5' arm 3' arm | ||
| 6774 | + | 42701 | 90 | 23 | -36.8 | NP_046209 | 5' arm 3' arm | ||
| 6775 | + | 42964 | 86 | 20 | -21.1 | NP_046209 | 5' arm 3' arm | ||
| 6776 | + | 43764 | 90 | 19.5 | -23.4 | NP_046210 | 5' arm 3' arm | ||
| 6777 | + | 44445 | 85 | 21 | -20.9 | NP_046210 | 5' arm 3' arm | ||
| 6778 | + | 45131 | 89 | 23 | -23.7 | NP_046210 | 5' arm 3' arm | ||
| 6779 | + | 45262 | 90 | 21 | -20.6 | NP_046210 | 5' arm 3' arm | ||
| 6780 | + | 49874 | 90 | 19 | -26.3 | NP_046218 | 5' arm 3' arm | ||
| 6781 | + | 50333 | 89 | 24 | -19.4 | NP_046219 | 5' arm 3' arm | ||
| 6782 | + | 50924 | 87 | 21.5 | -19.7 | NP_046220 | 5' arm 3' arm | ||
| 6783 | + | 52329 | 81 | 19 | -21.8 | NP_046221 | 5' arm 3' arm | ||
| 6784 | + | 54067 | 90 | 22.5 | -22.6 | NP_046225 | 5' arm 3' arm | ||
| 6785 | + | 54708 | 89 | 21.5 | -24.8 | NP_046225 | 5' arm 3' arm | ||
| 6786 | + | 56337 | 89 | 21.5 | -20.2 | NP_046226 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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