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| GenBank Identifier | RefSeq Acc. | Name |
| 45429963 | NC_005808.1 | Bordetella phage BMP-1 |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 26652 | + | 8231 | 84 | 20.5 | -21.6 | NP_996572 | 5' arm 3' arm | ||
| 26801 | - | 38297 | 83 | 20.5 | -26.6 | NP_996604 | 5' arm 3' arm | ||
| 26651 | + | 7273 | 87 | 20.5 | -24.5 | NP_996572 | 5' arm 3' arm | ||
| 26754 | - | 20061 | 90 | 20.5 | -22.2 | NP_996580 | 5' arm 3' arm | ||
| 26803 | - | 38986 | 88 | 20.5 | -21 | NP_996605 | 5' arm 3' arm | ||
| 26713 | + | 30550 | 89 | 20.5 | -23.3 | NP_996593 | 5' arm 3' arm | ||
| 26733 | - | 3090 | 90 | 20.5 | -22.5 | NP_996569 | 5' arm 3' arm | ||
| 26757 | - | 23571 | 87 | 20.5 | -22.7 | NP_996585 | 5' arm 3' arm | ||
| 26700 | + | 22325 | 90 | 20.5 | -21.3 | NP_996583 | 5' arm 3' arm | ||
| 26813 | - | 42492 | 87 | 20.5 | -27.5 | NP_996610 | 5' arm 3' arm | ||
| 26675 | + | 16014 | 90 | 20.5 | -23.6 | NP_996575 | 5' arm 3' arm | ||
| 26712 | + | 30382 | 89 | 20.5 | -22 | NP_996592 | 5' arm 3' arm | ||
| 26722 | + | 37768 | 89 | 20.5 | -25.4 | NP_996604 | 5' arm 3' arm | ||
| 26804 | - | 39226 | 88 | 20.5 | -22.9 | 5' arm 3' arm | |||
| 26665 | + | 13045 | 90 | 20.5 | -21.3 | NP_996573 | 5' arm 3' arm | ||
| 26664 | + | 12797 | 89 | 20.5 | -20.9 | NP_996573 | 5' arm 3' arm | ||
| 26764 | - | 27357 | 86 | 20.5 | -21.5 | NP_996591 | 5' arm 3' arm | ||
| 26660 | + | 11480 | 90 | 20.5 | -28.5 | NP_996572 | 5' arm 3' arm | ||
| 26656 | + | 9690 | 89 | 20.5 | -24.3 | NP_996572 | 5' arm 3' arm | ||
| 26697 | + | 21763 | 89 | 20.5 | -21.1 | NP_996583 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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