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| GenBank Identifier | RefSeq Acc. | Name |
| 45429963 | NC_005808.1 | Bordetella phage BMP-1 |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 26672 | + | 14923 | 89 | 22 | -20.2 | NP_996574 | 5' arm 3' arm | ||
| 26743 | - | 11144 | 90 | 22 | -20.2 | NP_996572 | 5' arm 3' arm | ||
| 26811 | - | 42062 | 87 | 22 | -26.1 | NP_996610 | 5' arm 3' arm | ||
| 26648 | + | 5692 | 90 | 21.5 | -20.3 | NP_996571 | 5' arm 3' arm | ||
| 26647 | + | 5566 | 88 | 21.5 | -22.1 | NP_996571 | 5' arm 3' arm | ||
| 26703 | + | 23940 | 90 | 21.5 | -25.3 | NP_996586 | 5' arm 3' arm | ||
| 26798 | - | 37586 | 80 | 21.5 | -34.1 | NP_996604 | 5' arm 3' arm | ||
| 26755 | - | 21439 | 89 | 21.5 | -25.1 | NP_996583 | 5' arm 3' arm | ||
| 26640 | + | 4118 | 90 | 21.5 | -22 | NP_996570 | 5' arm 3' arm | ||
| 26728 | - | 419 | 88 | 21.5 | -21.7 | NP_996564 | 5' arm 3' arm | ||
| 26717 | + | 33064 | 87 | 21.5 | -26.6 | NP_996598 | 5' arm 3' arm | ||
| 26682 | + | 17064 | 90 | 21.5 | -22 | NP_996575 | 5' arm 3' arm | ||
| 26676 | + | 16105 | 90 | 21.5 | -23.9 | NP_996575 | 5' arm 3' arm | ||
| 26690 | + | 19800 | 88 | 21.5 | -31.6 | NP_996580 | 5' arm 3' arm | ||
| 26701 | + | 22667 | 89 | 21.5 | -27.2 | NP_996583 | 5' arm 3' arm | ||
| 26794 | - | 36901 | 90 | 21.5 | -20.7 | NP_996604 | 5' arm 3' arm | ||
| 26766 | - | 28358 | 87 | 21.5 | -26.2 | NP_996591 | 5' arm 3' arm | ||
| 26711 | + | 27940 | 86 | 21.5 | -23.6 | NP_996591 | 5' arm 3' arm | ||
| 26662 | + | 12160 | 90 | 21 | -19.8 | NP_996572 | 5' arm 3' arm | ||
| 26663 | + | 12490 | 89 | 21 | -25.4 | NP_996573 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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