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GenBank Identifier | RefSeq Acc. | Name |
48697190 | NC_005887.1 | Burkholderia cepacia complex phage BcepC6B |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
27996 | + | 225 | 88 | 21 | -20.2 | YP_024921 | 5' arm 3' arm | ||
27997 | + | 1390 | 86 | 19.5 | -21.9 | YP_024923 | 5' arm 3' arm | ||
27998 | + | 1570 | 89 | 22 | -25.8 | YP_024923 | 5' arm 3' arm | ||
27999 | + | 1824 | 88 | 20 | -24.8 | YP_024923 | 5' arm 3' arm | ||
28000 | + | 1937 | 88 | 19 | -22.1 | YP_024923 | 5' arm 3' arm | ||
28001 | + | 2070 | 88 | 21.5 | -22.9 | YP_024923 | 5' arm 3' arm | ||
28002 | + | 2329 | 90 | 19.5 | -24.1 | YP_024923 | 5' arm 3' arm | ||
28003 | + | 2550 | 90 | 20 | -24.6 | YP_024923 | 5' arm 3' arm | ||
28004 | + | 3464 | 81 | 20.5 | -19.5 | YP_024925 | 5' arm 3' arm | ||
28005 | + | 3951 | 85 | 22 | -23.8 | YP_024925 | 5' arm 3' arm | ||
28006 | + | 4431 | 89 | 21.5 | -25.5 | YP_024925 | 5' arm 3' arm | ||
28007 | + | 4637 | 87 | 20 | -20.8 | YP_024925 | 5' arm 3' arm | ||
28008 | + | 5881 | 90 | 24 | -24.5 | YP_024927 | 5' arm 3' arm | ||
28009 | + | 7299 | 88 | 21 | -20.6 | YP_024929 | 5' arm 3' arm | ||
28010 | + | 7954 | 90 | 19 | -20.5 | YP_024931 | 5' arm 3' arm | ||
28011 | + | 8609 | 88 | 21.5 | -20.1 | YP_024932 | 5' arm 3' arm | ||
28012 | + | 8708 | 88 | 21.5 | -24.6 | YP_024932 | 5' arm 3' arm | ||
28013 | + | 9090 | 89 | 20 | -22.3 | YP_024932 | 5' arm 3' arm | ||
28014 | + | 9602 | 90 | 21 | -23.8 | YP_024932 | 5' arm 3' arm | ||
28015 | + | 9761 | 86 | 22.5 | -29.7 | YP_024932 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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