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| GenBank Identifier | RefSeq Acc. | Name |
| 48697190 | NC_005887.1 | Burkholderia cepacia complex phage BcepC6B |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 28041 | + | 22467 | 89 | 23.5 | -20.1 | YP_024941 | 5' arm 3' arm | ||
| 28040 | + | 22226 | 89 | 21 | -23.8 | YP_024940 | 5' arm 3' arm | ||
| 28039 | + | 22115 | 84 | 20.5 | -31.4 | YP_024940 | 5' arm 3' arm | ||
| 28148 | - | 21287 | 89 | 21.5 | -21 | YP_024939 | 5' arm 3' arm | ||
| 28150 | - | 21710 | 87 | 23 | -24.7 | YP_024939 | 5' arm 3' arm | ||
| 28147 | - | 21178 | 90 | 21 | -31.2 | YP_024939 | 5' arm 3' arm | ||
| 28036 | + | 21032 | 90 | 23 | -23.3 | YP_024939 | 5' arm 3' arm | ||
| 28037 | + | 21491 | 90 | 19.5 | -24.1 | YP_024939 | 5' arm 3' arm | ||
| 28038 | + | 21964 | 86 | 19 | -21.8 | YP_024939 | 5' arm 3' arm | ||
| 28149 | - | 21412 | 87 | 21 | -20.8 | YP_024939 | 5' arm 3' arm | ||
| 28034 | + | 19203 | 86 | 21.5 | -22.1 | YP_024938 | 5' arm 3' arm | ||
| 28035 | + | 19700 | 86 | 21 | -20.3 | YP_024938 | 5' arm 3' arm | ||
| 28030 | + | 17778 | 89 | 24.5 | -22 | YP_024937 | 5' arm 3' arm | ||
| 28141 | - | 17409 | 89 | 20.5 | -22.4 | YP_024937 | 5' arm 3' arm | ||
| 28028 | + | 17001 | 84 | 21 | -26.7 | YP_024937 | 5' arm 3' arm | ||
| 28029 | + | 17546 | 88 | 20.5 | -23.9 | YP_024937 | 5' arm 3' arm | ||
| 28145 | - | 18959 | 90 | 24.5 | -23.7 | YP_024937 | 5' arm 3' arm | ||
| 28140 | - | 16662 | 90 | 23.5 | -25.8 | YP_024937 | 5' arm 3' arm | ||
| 28032 | + | 18146 | 88 | 19 | -26 | YP_024937 | 5' arm 3' arm | ||
| 28031 | + | 17959 | 90 | 19.5 | -21 | YP_024937 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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