miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
27976	-	23031	89	20	-25.4	YP_024877		5' arm      3' arm
27988	-	36521	89	20	-21.1	YP_024894		5' arm      3' arm
27961	-	7540	89	22.5	-24.9	YP_024917		5' arm      3' arm
27962	-	11705	87	23.5	-35.4	YP_024863		5' arm      3' arm
27977	-	24469	87	21	-21.4	YP_024878		5' arm      3' arm
27985	-	34588	89	20.5	-26.4			5' arm      3' arm
27969	-	15362	87	27.5	-26.6	YP_024869		5' arm      3' arm
27986	-	35571	89	22.5	-21.3	YP_024893		5' arm      3' arm
27993	-	42090	90	19	-20.9	YP_024900		5' arm      3' arm
27980	-	26635	87	20.5	-20.1	YP_291180		5' arm      3' arm
27975	-	20981	90	20.5	-23.8	YP_024875		5' arm      3' arm
27973	-	17745	89	19.5	-24	YP_024872		5' arm      3' arm
27974	-	20494	89	21.5	-20.4	YP_024874		5' arm      3' arm
27979	-	25833	86	20	-22.6	YP_024895		5' arm      3' arm
27983	-	32661	89	21.5	-19.8	YP_024889		5' arm      3' arm
27989	-	37114	89	19	-21	YP_291192		5' arm      3' arm
27957	-	3688	88	21.5	-27.3	YP_024912		5' arm      3' arm
27960	-	7118	89	22	-22	YP_024916		5' arm      3' arm
27964	-	12908	81	20.5	-20.7	YP_024865		5' arm      3' arm
27965	-	13407	88	22.5	-26.4	YP_024865		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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