miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
16626	+	7969	88	23	-21			5' arm      3' arm
16686	-	144350	89	21.5	-26.9			5' arm      3' arm
16683	-	133011	87	23.5	-20.8			5' arm      3' arm
16687	-	144766	90	25	-26.1			5' arm      3' arm
16656	+	201860	86	20.5	-24.1			5' arm      3' arm
16633	+	56814	82	21	-25.4			5' arm      3' arm
16661	-	9152	89	23	-20.6	NP_690423		5' arm      3' arm
16627	+	11143	87	19.5	-19.4	NP_690423		5' arm      3' arm
16662	-	15878	88	22.5	-23.9	NP_690428		5' arm      3' arm
16663	-	25453	86	20.5	-28.5	NP_690438		5' arm      3' arm
16628	+	35467	78	21.5	-22.5	NP_690447		5' arm      3' arm
16631	+	39652	90	25	-21.1	NP_690450		5' arm      3' arm
16664	-	41446	87	22.5	-22.7	NP_690450		5' arm      3' arm
16632	+	40560	89	21.5	-20.1	NP_690450		5' arm      3' arm
16630	+	39526	89	23.5	-22.2	NP_690450		5' arm      3' arm
16629	+	39304	89	22.5	-25.4	NP_690450		5' arm      3' arm
16665	-	44807	85	22.5	-30.1	NP_690455		5' arm      3' arm
16666	-	53470	90	26	-27.4	NP_690456		5' arm      3' arm
16667	-	54911	89	23	-21.2	NP_690456		5' arm      3' arm
16668	-	57896	88	21	-27.6	NP_690460		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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