miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
16673	-	80567	90	24	-19.4	NP_690477		5' arm      3' arm
16627	+	11143	87	19.5	-19.4	NP_690423		5' arm      3' arm
16692	-	172863	87	22	-19.8	NP_690537		5' arm      3' arm
16640	+	81086	89	21	-20	NP_690477		5' arm      3' arm
16632	+	40560	89	21.5	-20.1	NP_690450		5' arm      3' arm
16644	+	101712	89	21	-20.2	NP_690489		5' arm      3' arm
16674	-	84631	90	21	-20.3	NP_690479		5' arm      3' arm
16682	-	130810	88	22	-20.4	NP_690509		5' arm      3' arm
16694	-	178642	90	21	-20.4	NP_690541		5' arm      3' arm
16675	-	90349	90	21	-20.53	NP_690481		5' arm      3' arm
16661	-	9152	89	23	-20.6	NP_690423		5' arm      3' arm
16658	+	214110	86	20	-20.6	NP_690564		5' arm      3' arm
16683	-	133011	87	23.5	-20.8			5' arm      3' arm
16651	+	143798	87	19.5	-21	NP_690517		5' arm      3' arm
16645	+	103109	90	24	-21	NP_690489		5' arm      3' arm
16626	+	7969	88	23	-21			5' arm      3' arm
16691	-	166060	90	24	-21	NP_690531		5' arm      3' arm
16689	-	152711	85	20.5	-21	NP_690523		5' arm      3' arm
16631	+	39652	90	25	-21.1	NP_690450		5' arm      3' arm
16667	-	54911	89	23	-21.2	NP_690456		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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