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| GenBank Identifier | RefSeq Acc. | Name |
| 22788711 | NC_004156.1 | Heliothis zea virus 1 |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 16688 | - | 145534 | 89 | 24.5 | -21.4 | NP_690518 | 5' arm 3' arm | ||
| 16634 | + | 57664 | 84 | 19 | -21.4 | NP_690460 | 5' arm 3' arm | ||
| 16636 | + | 62672 | 86 | 21.5 | -21.46 | NP_690465 | 5' arm 3' arm | ||
| 16671 | - | 72925 | 81 | 29 | -21.6 | NP_690471 | 5' arm 3' arm | ||
| 16670 | - | 63859 | 89 | 21 | -21.6 | NP_690466 | 5' arm 3' arm | ||
| 16648 | + | 112029 | 90 | 24.5 | -21.7 | NP_690494 | 5' arm 3' arm | ||
| 16695 | - | 180528 | 87 | 23 | -21.9 | NP_690542 | 5' arm 3' arm | ||
| 16677 | - | 109209 | 87 | 24.5 | -21.9 | NP_690493 | 5' arm 3' arm | ||
| 16697 | - | 196670 | 89 | 19.5 | -22 | NP_690553 | 5' arm 3' arm | ||
| 16676 | - | 96293 | 89 | 21.5 | -22 | NP_690486 | 5' arm 3' arm | ||
| 16639 | + | 78886 | 90 | 19.5 | -22.1 | NP_690476 | 5' arm 3' arm | ||
| 16630 | + | 39526 | 89 | 23.5 | -22.2 | NP_690450 | 5' arm 3' arm | ||
| 16703 | - | 227138 | 90 | 21.5 | -22.3 | NP_690573 | 5' arm 3' arm | ||
| 16655 | + | 180844 | 89 | 19 | -22.31 | NP_690542 | 5' arm 3' arm | ||
| 16637 | + | 67380 | 90 | 24 | -22.4 | NP_690469 | 5' arm 3' arm | ||
| 16696 | - | 181102 | 90 | 22 | -22.5 | NP_690542 | 5' arm 3' arm | ||
| 16628 | + | 35467 | 78 | 21.5 | -22.5 | NP_690447 | 5' arm 3' arm | ||
| 16638 | + | 75421 | 85 | 20.5 | -22.5 | NP_690473 | 5' arm 3' arm | ||
| 16654 | + | 175542 | 84 | 25.5 | -22.5 | NP_690538 | 5' arm 3' arm | ||
| 16701 | - | 213982 | 89 | 19.5 | -22.7 | NP_690564 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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