miRNA display CGI


Results 1 - 20 of 149 are showing below:
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GenBank Identifier RefSeq Acc. Name
9635581 NC_002484.1 Pseudomonas phage D3

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
8836 + 28452 89 27.5 -35.9 5' arm      3' arm
8796 + 3599 89 22.5 -33.9 NP_061501 5' arm      3' arm
8926 - 47422 90 20.5 -33.1 NP_061569 5' arm      3' arm
8808 + 11412 90 20 -32.9 NP_061515 5' arm      3' arm
8840 + 30677 89 21 -31.01 5' arm      3' arm
8888 - 7168 90 23.5 -29.9 5' arm      3' arm
8847 + 33367 89 23 -29.9 NP_061540 5' arm      3' arm
8835 + 27953 87 24 -29.4 NP_061531 5' arm      3' arm
8913 - 34922 90 23 -29.2 NP_061546 5' arm      3' arm
8879 - 2645 90 20 -28.7 NP_061500 5' arm      3' arm
8934 - 53533 84 22.5 -27.9 5' arm      3' arm
8862 + 43081 90 24 -27.8 NP_061562 5' arm      3' arm
8834 + 27808 85 21 -27.6 NP_061531 5' arm      3' arm
8815 + 15539 90 20.5 -27.6 NP_061521 5' arm      3' arm
8883 - 4329 89 21.5 -27.5 NP_061501 5' arm      3' arm
8906 - 19102 90 26 -27.5 NP_061523 5' arm      3' arm
8803 + 7362 88 22 -27.4 NP_061507 5' arm      3' arm
8814 + 14899 89 20.5 -27.4 NP_061519 5' arm      3' arm
8875 + 55430 90 20 -27.3 NP_061588 5' arm      3' arm
8823 + 17499 88 19 -26.8 NP_061522 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.