miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
29132	-	152716	90	19.5	-24.1	YP_068009		5' arm      3' arm
29141	-	158703	82	19	-27	YP_068012		5' arm      3' arm
29146	-	160860	84	20	-28.5	YP_068013		5' arm      3' arm
29156	-	169218	87	19.5	-26.6			5' arm      3' arm
29124	-	144303	85	19.5	-29.1			5' arm      3' arm
29127	-	148701	87	20.5	-23.9	YP_068006		5' arm      3' arm
29145	-	160643	90	19	-21.89	YP_068013		5' arm      3' arm
29157	-	170151	87	19.5	-26.6			5' arm      3' arm
29131	-	151908	88	22.5	-28.2	YP_068008		5' arm      3' arm
29153	-	166240	90	20	-24.4	YP_068017		5' arm      3' arm
29142	-	159464	90	19	-20.9	YP_068012		5' arm      3' arm
29136	-	156583	86	19	-21.3	YP_068011		5' arm      3' arm
29140	-	157982	87	19.5	-23.5	YP_068012		5' arm      3' arm
29147	-	161633	80	19.5	-24.3	YP_068014		5' arm      3' arm
29152	-	164873	88	21.5	-29.3	YP_068017		5' arm      3' arm
29155	-	168285	87	19.5	-26.6			5' arm      3' arm
29120	-	142709	88	21.5	-24.2			5' arm      3' arm
29117	-	141421	89	28.5	-33.1			3' arm
29123	-	144176	87	26.5	-24.1			5' arm      3' arm
29130	-	151701	89	19	-28.1	YP_068007		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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