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| GenBank Identifier | RefSeq Acc. | Name |
| 51518014 | NC_006146.1 | Cercopithecine herpesvirus 15 |
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| ID |
strand
|
start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 29154 | - | 167327 | 87 | 21.5 | -31.2 | 5' arm 3' arm | |||
| 29128 | - | 149679 | 82 | 19 | -26.5 | YP_068007 | 5' arm 3' arm | ||
| 29129 | - | 151534 | 87 | 19 | -24.8 | YP_068008 | 5' arm 3' arm | ||
| 29137 | - | 157019 | 87 | 21.5 | -23.8 | 5' arm 3' arm | |||
| 29144 | - | 159728 | 81 | 19.5 | -30.5 | YP_068012 | 5' arm 3' arm | ||
| 29122 | - | 143643 | 90 | 24.5 | -25.72 | 5' arm 3' arm | |||
| 29125 | - | 144591 | 89 | 23 | -27 | 5' arm 3' arm | |||
| 29149 | - | 162181 | 89 | 20 | -34.1 | 5' arm 3' arm | |||
| 29134 | - | 155528 | 89 | 19 | -20 | YP_068010 | 5' arm 3' arm | ||
| 29132 | - | 152716 | 90 | 19.5 | -24.1 | YP_068009 | 5' arm 3' arm | ||
| 29148 | - | 161995 | 85 | 22 | -25.9 | 5' arm 3' arm | |||
| 29151 | - | 164759 | 90 | 25.5 | -19.8 | YP_068017 | 5' arm 3' arm | ||
| 29119 | - | 142559 | 90 | 21.5 | -29.4 | 5' arm 3' arm | |||
| 29121 | - | 143460 | 90 | 22 | -25 | 5' arm 3' arm | |||
| 29130 | - | 151701 | 89 | 19 | -28.1 | YP_068007 | 5' arm 3' arm | ||
| 29139 | - | 157550 | 90 | 19.5 | -26.8 | YP_068012 | 5' arm 3' arm | ||
| 29143 | - | 159604 | 90 | 19.5 | -24 | YP_068012 | 5' arm 3' arm | ||
| 29155 | - | 168285 | 87 | 19.5 | -26.6 | 5' arm 3' arm | |||
| 29135 | - | 156127 | 90 | 20.5 | -26.3 | YP_068010 | 5' arm 3' arm | ||
| 29133 | - | 155322 | 87 | 19 | -22.4 | YP_068010 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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