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| GenBank Identifier | RefSeq Acc. | Name |
| 51518014 | NC_006146.1 | Cercopithecine herpesvirus 15 |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 28916 | + | 156337 | 89 | 19 | -24.4 | YP_068011 | 5' arm 3' arm | ||
| 29141 | - | 158703 | 82 | 19 | -27 | YP_068012 | 5' arm 3' arm | ||
| 29056 | - | 93767 | 85 | 19 | -21.5 | YP_067977 | 5' arm 3' arm | ||
| 29136 | - | 156583 | 86 | 19 | -21.3 | YP_068011 | 5' arm 3' arm | ||
| 28724 | + | 684 | 89 | 19 | -20.8 | YP_067938 | 5' arm 3' arm | ||
| 28725 | + | 1817 | 85 | 19 | -23.6 | YP_067940 | 5' arm 3' arm | ||
| 28726 | + | 2253 | 87 | 19 | -21.11 | YP_067940 | 5' arm 3' arm | ||
| 28728 | + | 2793 | 90 | 19 | -24.3 | YP_067940 | 5' arm 3' arm | ||
| 28729 | + | 3681 | 88 | 19 | -22.4 | YP_067940 | 5' arm 3' arm | ||
| 28730 | + | 3858 | 90 | 19 | -22.2 | YP_067940 | 5' arm 3' arm | ||
| 29133 | - | 155322 | 87 | 19 | -22.4 | YP_068010 | 5' arm 3' arm | ||
| 28837 | + | 104725 | 90 | 19 | -20.6 | YP_067985 | 5' arm 3' arm | ||
| 28932 | + | 167299 | 90 | 19 | -29.8 | 5' arm 3' arm | |||
| 29142 | - | 159464 | 90 | 19 | -20.9 | YP_068012 | 5' arm 3' arm | ||
| 29035 | - | 78524 | 86 | 19 | -22.6 | YP_067966 | 5' arm 3' arm | ||
| 29052 | - | 92739 | 89 | 19 | -24.91 | YP_067976 | 5' arm 3' arm | ||
| 28899 | + | 146687 | 90 | 19 | -25.7 | YP_068005 | 5' arm 3' arm | ||
| 29077 | - | 106499 | 89 | 19 | -19.8 | YP_067986 | 5' arm 3' arm | ||
| 28770 | + | 41892 | 88 | 19 | -23.1 | YP_067948 | 5' arm 3' arm | ||
| 28792 | + | 53958 | 89 | 19 | -27.3 | YP_067951 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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