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| GenBank Identifier | RefSeq Acc. | Name |
| 51518014 | NC_006146.1 | Cercopithecine herpesvirus 15 |
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| ID |
strand
|
start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 29117 | - | 141421 | 89 | 28.5 | -33.1 | 3' arm | |||
| 29118 | - | 141629 | 87 | 20.5 | -24.5 | 5' arm 3' arm | |||
| 29151 | - | 164759 | 90 | 25.5 | -19.8 | YP_068017 | 5' arm 3' arm | ||
| 29149 | - | 162181 | 89 | 20 | -34.1 | 5' arm 3' arm | |||
| 29144 | - | 159728 | 81 | 19.5 | -30.5 | YP_068012 | 5' arm 3' arm | ||
| 29139 | - | 157550 | 90 | 19.5 | -26.8 | YP_068012 | 5' arm 3' arm | ||
| 29137 | - | 157019 | 87 | 21.5 | -23.8 | 5' arm 3' arm | |||
| 29136 | - | 156583 | 86 | 19 | -21.3 | YP_068011 | 5' arm 3' arm | ||
| 29127 | - | 148701 | 87 | 20.5 | -23.9 | YP_068006 | 5' arm 3' arm | ||
| 29128 | - | 149679 | 82 | 19 | -26.5 | YP_068007 | 5' arm 3' arm | ||
| 29080 | - | 108693 | 90 | 19.5 | -24.6 | YP_067989 | 5' arm 3' arm | ||
| 29083 | - | 111639 | 88 | 20.5 | -29.7 | YP_067987 | 5' arm 3' arm | ||
| 29110 | - | 133946 | 89 | 25 | -19.9 | 5' arm 3' arm | |||
| 29106 | - | 130411 | 89 | 22 | -19.7 | YP_068001 | 5' arm 3' arm | ||
| 29098 | - | 126276 | 89 | 23 | -29.4 | YP_067998 | 5' arm 3' arm | ||
| 29102 | - | 128507 | 89 | 21 | -23.7 | YP_068000 | 5' arm 3' arm | ||
| 29099 | - | 126600 | 90 | 19.5 | -23.7 | YP_067999 | 5' arm 3' arm | ||
| 29093 | - | 121316 | 88 | 21 | -26 | YP_067995 | 5' arm 3' arm | ||
| 29088 | - | 118638 | 90 | 20.5 | -24.4 | YP_067994 | 5' arm 3' arm | ||
| 29086 | - | 114474 | 86 | 20 | -21.6 | YP_067993 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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