miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
11279	+	6091	88	21.5	-23	NP_203179		5' arm      3' arm
11280	+	18992	90	20.5	-32.3			5' arm      3' arm
11281	+	24020	90	20	-26.4	NP_203201		5' arm      3' arm
11282	+	32170	90	19	-25.7	NP_203211		5' arm      3' arm
11283	+	43293	89	23	-31.7	NP_203226		5' arm      3' arm
11284	+	51300	90	24	-30.1	NP_203231		5' arm      3' arm
11285	+	51632	90	21.5	-20.1	NP_203231		5' arm      3' arm
11286	+	56817	89	20.5	-21.4	NP_203241		5' arm      3' arm
11287	+	57889	86	20	-23.3	NP_203243		5' arm      3' arm
11288	+	72849	89	21.5	-19.8	NP_203256		5' arm      3' arm
11289	+	73676	89	23	-23.4	NP_203257		5' arm      3' arm
11290	+	87250	89	22	-27.3	NP_203275		5' arm      3' arm
11291	+	89913	89	22.5	-23	NP_203277		5' arm      3' arm
11292	+	100668	90	21	-22.6	NP_203288		5' arm      3' arm
11293	+	105144	90	25	-19.7	NP_203291		5' arm      3' arm
11294	+	108541	90	19.5	-21.1	NP_203295		5' arm      3' arm
11295	+	109585	90	20	-25	NP_203297		5' arm      3' arm
11296	+	114306	89	23.5	-24	NP_203300		5' arm      3' arm
11297	-	3148	88	19.5	-24.6	NP_203175		5' arm      3' arm
11298	-	19080	86	20.5	-28.2			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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