miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
13007	-	52728	87	20.5	-20.3			5' arm      3' arm
13006	-	52591	90	23	-20.3	NP_569825		5' arm      3' arm
13005	-	52452	89	21	-24.1	NP_569825		5' arm      3' arm
13004	-	52307	88	24.5	-26.5	NP_569824		5' arm      3' arm
13003	-	52163	90	21	-22.9	NP_569823		5' arm      3' arm
13002	-	51894	89	20	-21.8	NP_569822		5' arm      3' arm
13001	-	51173	90	24.5	-19.8			5' arm      3' arm
13000	-	51049	85	19	-21			5' arm      3' arm
12999	-	50900	89	23.5	-31.3	NP_569819		5' arm      3' arm
12998	-	50686	90	19.5	-29.9			5' arm      3' arm
12997	-	50213	90	21	-23.8	NP_569818		5' arm      3' arm
12996	-	50054	85	22	-26.6			5' arm      3' arm
12995	-	49632	88	20	-21.2	NP_569816		5' arm      3' arm
12994	-	48866	87	22	-23.6	NP_569815		5' arm      3' arm
12993	-	48686	87	20.5	-22	NP_569814		5' arm      3' arm
12992	-	47906	90	25.5	-25.8	NP_569813		5' arm      3' arm
12991	-	47808	89	20.5	-20	NP_569813		5' arm      3' arm
12990	-	47643	87	19.5	-21.5	NP_569812		5' arm      3' arm
12989	-	47353	88	20	-26.8	NP_569811		5' arm      3' arm
12988	-	46969	90	20.5	-22.8	NP_569810		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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