Results 41 - 60 of 246 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
13937 | 5' | -52.8 | NC_003521.1 | + | 118101 | 0.67 | 0.992559 |
Target: 5'- -cGG-ACGAgGACGACuGCGA-GGCc -3' miRNA: 3'- caCCaUGCUgCUGCUGuCGCUaCUGc -5' |
|||||||
13937 | 5' | -52.8 | NC_003521.1 | + | 239785 | 0.67 | 0.992559 |
Target: 5'- aUGGUuccGCuACGGCGcCGGCGAcgUGGCGc -3' miRNA: 3'- cACCA---UGcUGCUGCuGUCGCU--ACUGC- -5' |
|||||||
13937 | 5' | -52.8 | NC_003521.1 | + | 80763 | 0.67 | 0.992559 |
Target: 5'- -cGGagcCGugGGCGGC-GCGGUGGCc -3' miRNA: 3'- caCCau-GCugCUGCUGuCGCUACUGc -5' |
|||||||
13937 | 5' | -52.8 | NC_003521.1 | + | 77404 | 0.67 | 0.992559 |
Target: 5'- cUGGUA-GGCaGCGGCAGCcGAcGACGg -3' miRNA: 3'- cACCAUgCUGcUGCUGUCG-CUaCUGC- -5' |
|||||||
13937 | 5' | -52.8 | NC_003521.1 | + | 128259 | 0.67 | 0.992559 |
Target: 5'- -aGGUAggcCGugGugGGCAGCGcguugcgGAUGg -3' miRNA: 3'- caCCAU---GCugCugCUGUCGCua-----CUGC- -5' |
|||||||
13937 | 5' | -52.8 | NC_003521.1 | + | 206945 | 0.67 | 0.992559 |
Target: 5'- -aGGUA-GAUGcUGACGGCGAUGAg- -3' miRNA: 3'- caCCAUgCUGCuGCUGUCGCUACUgc -5' |
|||||||
13937 | 5' | -52.8 | NC_003521.1 | + | 43597 | 0.67 | 0.992559 |
Target: 5'- -cGGcgACGAgGACGACGagcGCGAcGACa -3' miRNA: 3'- caCCa-UGCUgCUGCUGU---CGCUaCUGc -5' |
|||||||
13937 | 5' | -52.8 | NC_003521.1 | + | 153113 | 0.67 | 0.992559 |
Target: 5'- -gGGcGCGcGCGACGGCAGCa--GGCGg -3' miRNA: 3'- caCCaUGC-UGCUGCUGUCGcuaCUGC- -5' |
|||||||
13937 | 5' | -52.8 | NC_003521.1 | + | 103687 | 0.67 | 0.992559 |
Target: 5'- -aGGUGCuGAUGAaccaCGACGGUGAcGugGg -3' miRNA: 3'- caCCAUG-CUGCU----GCUGUCGCUaCugC- -5' |
|||||||
13937 | 5' | -52.8 | NC_003521.1 | + | 157949 | 0.67 | 0.992559 |
Target: 5'- cGUGGccugagGCugGGCGACGACGGCGcUGguaGCGa -3' miRNA: 3'- -CACCa-----UG--CUGCUGCUGUCGCuAC---UGC- -5' |
|||||||
13937 | 5' | -52.8 | NC_003521.1 | + | 164904 | 0.67 | 0.992559 |
Target: 5'- cGUGaugACGACGACGAUgAG-GAUGACc -3' miRNA: 3'- -CACca-UGCUGCUGCUG-UCgCUACUGc -5' |
|||||||
13937 | 5' | -52.8 | NC_003521.1 | + | 201531 | 0.67 | 0.992559 |
Target: 5'- aUGGUuccGCuACGGCGcCGGCGAcgUGGCGc -3' miRNA: 3'- cACCA---UGcUGCUGCuGUCGCU--ACUGC- -5' |
|||||||
13937 | 5' | -52.8 | NC_003521.1 | + | 225799 | 0.67 | 0.992459 |
Target: 5'- cUGGUgACGACGcguucgucgacgcGCGACGGCGccGAgCGg -3' miRNA: 3'- cACCA-UGCUGC-------------UGCUGUCGCuaCU-GC- -5' |
|||||||
13937 | 5' | -52.8 | NC_003521.1 | + | 76048 | 0.67 | 0.992459 |
Target: 5'- -cGGaGCGGgccgccagacgcuUGAUGACGGCGAUGuGCGg -3' miRNA: 3'- caCCaUGCU-------------GCUGCUGUCGCUAC-UGC- -5' |
|||||||
13937 | 5' | -52.8 | NC_003521.1 | + | 142689 | 0.67 | 0.991511 |
Target: 5'- cUGGUGC--CGACGcUGGUGGUGACGu -3' miRNA: 3'- cACCAUGcuGCUGCuGUCGCUACUGC- -5' |
|||||||
13937 | 5' | -52.8 | NC_003521.1 | + | 55927 | 0.67 | 0.991511 |
Target: 5'- gGUGGggccCGACGACGAggUGGCGcaccuguggagcGUGACGc -3' miRNA: 3'- -CACCau--GCUGCUGCU--GUCGC------------UACUGC- -5' |
|||||||
13937 | 5' | -52.8 | NC_003521.1 | + | 133225 | 0.67 | 0.991511 |
Target: 5'- -gGGUucaGgGGCGAUGGCGGuCGAgGACGa -3' miRNA: 3'- caCCA---UgCUGCUGCUGUC-GCUaCUGC- -5' |
|||||||
13937 | 5' | -52.8 | NC_003521.1 | + | 19058 | 0.67 | 0.991511 |
Target: 5'- -aGG-ACGGCGGCG-CGGCGcaGACGc -3' miRNA: 3'- caCCaUGCUGCUGCuGUCGCuaCUGC- -5' |
|||||||
13937 | 5' | -52.8 | NC_003521.1 | + | 93695 | 0.67 | 0.990349 |
Target: 5'- -gGGUGCGA-GAUGGCggaucgcguGGCGGUGAgGa -3' miRNA: 3'- caCCAUGCUgCUGCUG---------UCGCUACUgC- -5' |
|||||||
13937 | 5' | -52.8 | NC_003521.1 | + | 215050 | 0.67 | 0.990349 |
Target: 5'- -cGGUGaaGAgGACGGCGGCGAgcggGAgGg -3' miRNA: 3'- caCCAUg-CUgCUGCUGUCGCUa---CUgC- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home