Results 21 - 40 of 71 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
32831 | 5' | -47.8 | NC_007346.1 | + | 261869 | 0.7 | 0.999391 |
Target: 5'- -aGGAAc-AACGCACCGGCaGCGGUg -3' miRNA: 3'- caCUUUuuUUGUGUGGUUGcCGCCGa -5' |
|||||||
32831 | 5' | -47.8 | NC_007346.1 | + | 149946 | 0.7 | 0.999506 |
Target: 5'- gGUGAGc--AACAUACCGcuucgcCGGCGGCa -3' miRNA: 3'- -CACUUuuuUUGUGUGGUu-----GCCGCCGa -5' |
|||||||
32831 | 5' | -47.8 | NC_007346.1 | + | 310125 | 0.7 | 0.999506 |
Target: 5'- gGUGAAGGcAGugGCGgaGAUGGCGGCg -3' miRNA: 3'- -CACUUUU-UUugUGUggUUGCCGCCGa -5' |
|||||||
32831 | 5' | -47.8 | NC_007346.1 | + | 128688 | 0.7 | 0.999602 |
Target: 5'- gGUGAAcguAACGaccuGCCgAACGGCGGCg -3' miRNA: 3'- -CACUUuuuUUGUg---UGG-UUGCCGCCGa -5' |
|||||||
32831 | 5' | -47.8 | NC_007346.1 | + | 310212 | 0.7 | 0.999746 |
Target: 5'- gGUGGAGGAG--AUugCGAUGGUGGCa -3' miRNA: 3'- -CACUUUUUUugUGugGUUGCCGCCGa -5' |
|||||||
32831 | 5' | -47.8 | NC_007346.1 | + | 61135 | 0.7 | 0.999746 |
Target: 5'- gGUGGu--GAugGCGCCGgugAUGGCGGUg -3' miRNA: 3'- -CACUuuuUUugUGUGGU---UGCCGCCGa -5' |
|||||||
32831 | 5' | -47.8 | NC_007346.1 | + | 238249 | 0.69 | 0.999799 |
Target: 5'- cGUGucgguGACugG-CGACGGCGGCUc -3' miRNA: 3'- -CACuuuuuUUGugUgGUUGCCGCCGA- -5' |
|||||||
32831 | 5' | -47.8 | NC_007346.1 | + | 243208 | 0.69 | 0.999799 |
Target: 5'- -gGAAAGAAAUACGCCGAgcacGCGGUa -3' miRNA: 3'- caCUUUUUUUGUGUGGUUgc--CGCCGa -5' |
|||||||
32831 | 5' | -47.8 | NC_007346.1 | + | 314824 | 0.69 | 0.999842 |
Target: 5'- -aGAAGAAAugGCAaCGAauGCGGCUa -3' miRNA: 3'- caCUUUUUUugUGUgGUUgcCGCCGA- -5' |
|||||||
32831 | 5' | -47.8 | NC_007346.1 | + | 304867 | 0.69 | 0.999842 |
Target: 5'- -cGu--AAGAC-CACCGugGGCGGUa -3' miRNA: 3'- caCuuuUUUUGuGUGGUugCCGCCGa -5' |
|||||||
32831 | 5' | -47.8 | NC_007346.1 | + | 349822 | 0.69 | 0.999842 |
Target: 5'- gGUGGAcuugguGGugGCGaCGACGGCGGCg -3' miRNA: 3'- -CACUUuu----UUugUGUgGUUGCCGCCGa -5' |
|||||||
32831 | 5' | -47.8 | NC_007346.1 | + | 335742 | 0.69 | 0.999877 |
Target: 5'- -gGAAuAAAACAUAgaaCAGCGGgGGCUu -3' miRNA: 3'- caCUUuUUUUGUGUg--GUUGCCgCCGA- -5' |
|||||||
32831 | 5' | -47.8 | NC_007346.1 | + | 238940 | 0.69 | 0.999877 |
Target: 5'- cUGGGAuGAugACgaGCUGAUGGCGGCg -3' miRNA: 3'- cACUUUuUUugUG--UGGUUGCCGCCGa -5' |
|||||||
32831 | 5' | -47.8 | NC_007346.1 | + | 308668 | 0.69 | 0.999877 |
Target: 5'- gGUGGAGGAGAU--GgUGGCGGCGGCa -3' miRNA: 3'- -CACUUUUUUUGugUgGUUGCCGCCGa -5' |
|||||||
32831 | 5' | -47.8 | NC_007346.1 | + | 57404 | 0.69 | 0.999877 |
Target: 5'- -gGAGGGAAACugGgUAAUGGUGGUg -3' miRNA: 3'- caCUUUUUUUGugUgGUUGCCGCCGa -5' |
|||||||
32831 | 5' | -47.8 | NC_007346.1 | + | 249000 | 0.69 | 0.999902 |
Target: 5'- uUGAGAAAcucGACgaugguuGCGgUAACGGCGGCg -3' miRNA: 3'- cACUUUUU---UUG-------UGUgGUUGCCGCCGa -5' |
|||||||
32831 | 5' | -47.8 | NC_007346.1 | + | 239292 | 0.69 | 0.999904 |
Target: 5'- -cGGAGAuuGCggcaaagugguAUGCCGACGGCGGUc -3' miRNA: 3'- caCUUUUuuUG-----------UGUGGUUGCCGCCGa -5' |
|||||||
32831 | 5' | -47.8 | NC_007346.1 | + | 198842 | 0.69 | 0.999904 |
Target: 5'- uUGAGAu-GGCgGCGgCGAUGGCGGCg -3' miRNA: 3'- cACUUUuuUUG-UGUgGUUGCCGCCGa -5' |
|||||||
32831 | 5' | -47.8 | NC_007346.1 | + | 200663 | 0.69 | 0.999926 |
Target: 5'- gGUGAucguGGGgGCAUUGGCGGUGGCg -3' miRNA: 3'- -CACUuuu-UUUgUGUGGUUGCCGCCGa -5' |
|||||||
32831 | 5' | -47.8 | NC_007346.1 | + | 171310 | 0.69 | 0.999926 |
Target: 5'- -cGAcuu-GACAUACCGGCGGCaGCc -3' miRNA: 3'- caCUuuuuUUGUGUGGUUGCCGcCGa -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home