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| GenBank Identifier | RefSeq Acc. | Name |
| 11038431 | NC_001875.2 | Orgyia pseudotsugata multicapsid nucleopolyhedrovirus |
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| ID |
strand
|
start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 6989 | - | 97849 | 90 | 24 | -23.3 | NP_046275 | 5' arm 3' arm | ||
| 6994 | - | 99511 | 88 | 20.5 | -24 | NP_046277 | 5' arm 3' arm | ||
| 7029 | - | 131790 | 87 | 23 | -20.2 | NP_046308 | 5' arm 3' arm | ||
| 7021 | - | 129157 | 90 | 20 | -24.1 | NP_046307 | 5' arm 3' arm | ||
| 7017 | - | 124998 | 67 | 19 | -24.2 | NP_046302 | 5' arm 3' arm | ||
| 7015 | - | 120961 | 87 | 22 | -21.5 | NP_046297 | 5' arm 3' arm | ||
| 7010 | - | 113516 | 89 | 22.5 | -20.9 | NP_046290 | 5' arm 3' arm | ||
| 7007 | - | 111267 | 81 | 20 | -26.5 | NP_046287 | 5' arm 3' arm | ||
| 6997 | - | 101601 | 90 | 26 | -22.6 | 5' arm 3' arm | |||
| 7002 | - | 104196 | 82 | 22.5 | -23.1 | NP_046281 | 5' arm 3' arm | ||
| 6952 | - | 62393 | 89 | 19 | -21.6 | NP_046230 | 5' arm 3' arm | ||
| 6958 | - | 66386 | 88 | 19.5 | -20.6 | NP_046239 | 5' arm 3' arm | ||
| 6985 | - | 95380 | 88 | 22.5 | -23.6 | 5' arm 3' arm | |||
| 6980 | - | 87411 | 88 | 22 | -20 | NP_046261 | 5' arm 3' arm | ||
| 6974 | - | 83539 | 90 | 22 | -23.6 | NP_046255 | 5' arm 3' arm | ||
| 6975 | - | 84454 | 90 | 19 | -22.7 | NP_046257 | 5' arm 3' arm | ||
| 6967 | - | 74374 | 88 | 23 | -30.5 | NP_046247 | 5' arm 3' arm | ||
| 6966 | - | 74187 | 90 | 21.5 | -20.5 | NP_046247 | 5' arm 3' arm | ||
| 6963 | - | 71683 | 90 | 19.5 | -21.4 | NP_046244 | 5' arm 3' arm | ||
| 6956 | - | 65809 | 90 | 24.5 | -27.6 | NP_046237 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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