miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
27016	+	425	90	21	-32	YP_003772		5' arm      3' arm
27017	+	1380	90	19.5	-20.2	YP_003773		5' arm      3' arm
27018	+	1592	90	23	-24.8	YP_003773		5' arm      3' arm
27019	+	1974	90	21	-23.6	YP_003774		5' arm      3' arm
27020	+	2445	90	19.5	-21.5	YP_003774		5' arm      3' arm
27021	+	3180	83	19	-20	YP_003775		5' arm      3' arm
27022	+	4777	90	19	-20.74	YP_003777		5' arm      3' arm
27023	+	5464	89	23.5	-22.5	YP_003777		5' arm      3' arm
27024	+	6181	89	22	-32.5	YP_003777		5' arm      3' arm
27025	+	6377	87	22	-20.5	YP_003777		5' arm      3' arm
27026	+	7239	90	19.5	-21.84	YP_003777		5' arm      3' arm
27027	+	9329	89	21	-25.8	YP_003778		5' arm      3' arm
27028	+	9476	87	20.5	-25.8	YP_003778		5' arm      3' arm
27029	+	10427	90	22	-33.6	YP_003778		5' arm      3' arm
27030	+	11029	90	19	-22.7	YP_003778		5' arm      3' arm
27031	+	11173	89	19.5	-23.5	YP_003778		5' arm      3' arm
27032	+	11519	89	20.5	-24.7	YP_003778		5' arm      3' arm
27033	+	12550	87	20.5	-19.6	YP_003781		5' arm      3' arm
27034	+	12681	85	19.5	-20	YP_003781		5' arm      3' arm
27035	+	12858	89	19	-23.4	YP_003781		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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