miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
31847	-	30247	86	19.5	-20.2	YP_223979		5' arm      3' arm
31752	+	32498	88	20	-20.3	YP_223983		5' arm      3' arm
31884	-	48317	86	19	-20.3	YP_224002		5' arm      3' arm
31866	-	38715	89	20.5	-20.4	YP_223991		5' arm      3' arm
31783	-	1605	88	22.5	-20.4	YP_223929		5' arm      3' arm
31809	-	13372	90	20	-20.4	YP_223944		5' arm      3' arm
31890	-	51338	89	20	-20.5	YP_224006		5' arm      3' arm
31719	+	8311	90	19	-20.5	YP_223937		5' arm      3' arm
31906	-	59248	90	19.5	-20.5	YP_224011		5' arm      3' arm
31744	+	26288	89	21.5	-20.5	YP_223967		5' arm      3' arm
31810	-	14152	89	20.5	-20.5	YP_223946		5' arm      3' arm
31892	-	51830	86	20.5	-20.6	YP_224006		5' arm      3' arm
31912	-	63557	87	19	-20.6	YP_224014		5' arm      3' arm
31888	-	50850	88	20.5	-20.6	YP_224006		5' arm      3' arm
31743	+	25748	89	20	-20.6	YP_223965		5' arm      3' arm
31804	-	10018	90	19.5	-20.7	YP_223938		5' arm      3' arm
31828	-	22776	89	20.5	-20.7	YP_223957		5' arm      3' arm
31815	-	17323	89	24	-20.7	YP_223951		5' arm      3' arm
31854	-	32252	89	19	-20.7	YP_223983		5' arm      3' arm
31759	+	38774	87	19	-20.8	YP_223991		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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