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| GenBank Identifier | RefSeq Acc. | Name |
| 62327168 | NC_006938.1 | Bacteriophage phi JL001 |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 31807 | - | 12545 | 89 | 22.5 | -21.1 | YP_223943 | 5' arm 3' arm | ||
| 31773 | + | 54333 | 89 | 22.5 | -24.9 | YP_224008 | 5' arm 3' arm | ||
| 31908 | - | 62332 | 89 | 22.5 | -25.6 | YP_224012 | 5' arm 3' arm | ||
| 31783 | - | 1605 | 88 | 22.5 | -20.4 | YP_223929 | 5' arm 3' arm | ||
| 31742 | + | 24914 | 90 | 22.5 | -22.6 | YP_223962 | 5' arm 3' arm | ||
| 31897 | - | 54320 | 87 | 22 | -32.7 | YP_224008 | 5' arm 3' arm | ||
| 31802 | - | 9356 | 89 | 22 | -27.7 | YP_223938 | 5' arm 3' arm | ||
| 31846 | - | 29958 | 89 | 22 | -27.51 | YP_223978 | 5' arm 3' arm | ||
| 31790 | - | 5571 | 87 | 22 | -31.7 | 5' arm 3' arm | |||
| 31793 | - | 6446 | 90 | 22 | -21.6 | YP_223935 | 5' arm 3' arm | ||
| 31889 | - | 51010 | 90 | 22 | -22.7 | YP_224006 | 5' arm 3' arm | ||
| 31861 | - | 37117 | 90 | 22 | -30.9 | YP_223989 | 5' arm 3' arm | ||
| 31898 | - | 54536 | 89 | 22 | -30.3 | YP_224008 | 5' arm 3' arm | ||
| 31855 | - | 32837 | 88 | 22 | -19.6 | YP_223983 | 5' arm 3' arm | ||
| 31869 | - | 39683 | 88 | 22 | -25.5 | YP_223992 | 5' arm 3' arm | ||
| 31844 | - | 29588 | 88 | 22 | -25 | YP_223976 | 5' arm 3' arm | ||
| 31792 | - | 6255 | 87 | 22 | -25.6 | YP_223935 | 5' arm 3' arm | ||
| 31718 | + | 6320 | 85 | 21.5 | -30.1 | YP_223935 | 5' arm 3' arm | ||
| 31891 | - | 51661 | 90 | 21.5 | -19.8 | YP_224006 | 5' arm 3' arm | ||
| 31834 | - | 25540 | 88 | 21.5 | -24.6 | YP_223964 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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